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  3. Camellia sinensis var. sinensis cv. 'Fuding Dabaicha'
  4. Sequence
  5. FUDINGDABAI14117

FUDINGDABAI14117


Description : no annotation & original description: none


Gene families : OG0003794 (OrthoFinder) Phylogenetic Tree(s): OG0003794_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: FUDINGDABAI14117
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA25927 No alias no annotation & original description: none 0.03 OrthoFinder
GWHTACFB023698 No alias no annotation & original description: Protein=GWHPACFB023698 0.08 OrthoFinder
LJCHANGYE18131 No alias no annotation & original description: none 0.02 OrthoFinder
ZHONGCHA15224 No alias no annotation & original description: none 0.04 OrthoFinder
ANJIBAICHA25927 No alias no annotation & original description: none 0.03 OrthoFinder
CSS0002176.1 CSS0002176 no annotation & original description: gene=CSS0002176 0.04 OrthoFinder
GWHTACFB023698 No alias no annotation & original description: Protein=GWHPACFB023698 0.08 OrthoFinder
LJCHANGYE18131 No alias no annotation & original description: none 0.02 OrthoFinder
ZHONGCHA15224 No alias no annotation & original description: none 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEA Interproscan
CC GO:0005685 U1 snRNP IEA Interproscan
BP GO:0006376 mRNA splice site recognition IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
InterPro domains Description Start Stop
IPR004882 Luc7-rel 208 327
IPR004882 Luc7-rel 2 171
No external refs found!