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  5. FUDINGDABAI15616

FUDINGDABAI15616 (PTB2, ATPTB2)


Aliases : PTB2, ATPTB2

Description : Polypyrimidine tract-binding protein homolog 2 & original description: none


Gene families : OG0007611 (OrthoFinder) Phylogenetic Tree(s): OG0007611_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: FUDINGDABAI15616
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
CSA015443.1 CSA015443, PTB2, ATPTB2 Polypyrimidine tract-binding protein homolog 2 &... 0.12 OrthoFinder
GWHTACFB023004 PTB2, ATPTB2 Polypyrimidine tract-binding protein homolog 2 &... 0.09 OrthoFinder
CSA015443.1 CSA015443, PTB2, ATPTB2 Polypyrimidine tract-binding protein homolog 2 &... 0.12 OrthoFinder
GWHTACFB023004 PTB2, ATPTB2 Polypyrimidine tract-binding protein homolog 2 &... 0.09 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR021790 PTBP1-like_RRM2 242 320
IPR000504 RRM_dom 129 179
IPR000504 RRM_dom 22 73
No external refs found!