FUDINGDABAI20212

Description : 30S ribosomal protein S6 alpha, chloroplastic & original description: none

Gene families : OG0004748 (OrthoFinder) Phylogenetic Tree(s): OG0004748_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: FUDINGDABAI20212
Cluster	HCCA: Cluster_260

Target	Alias	Description	ECC score	Gene Family Method
ANJIBAICHA27900	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.05	OrthoFinder
GWHTACFB009310	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.13	OrthoFinder
GWHTAZTZ040780	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.03	OrthoFinder
JINXUAN22468	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.07	OrthoFinder
JINXUAN22469	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.04	OrthoFinder
LJCHANGYE22858	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.03	OrthoFinder
TIEGUANYIN11931	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.06	OrthoFinder
ZHONGCHA19601	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.06	OrthoFinder
ANJIBAICHA27900	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.05	OrthoFinder
CSS0022378.1	CSS0022378	30S ribosomal protein S6 alpha, chloroplastic &...	0.07	OrthoFinder
CSS0038140.1	CSS0038140	30S ribosomal protein S6 alpha, chloroplastic &...	0.04	OrthoFinder
CSS0048233.1	CSS0048233	30S ribosomal protein S6 alpha, chloroplastic &...	0.07	OrthoFinder
GWHTACFB009310	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.13	OrthoFinder
GWHTAZTZ040780	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.03	OrthoFinder
JINXUAN22468	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.07	OrthoFinder
JINXUAN22469	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.04	OrthoFinder
LJCHANGYE22858	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.03	OrthoFinder
TIEGUANYIN11931	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.06	OrthoFinder
ZHONGCHA19601	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.06	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019843	rRNA binding	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEP	HCCA
MF	GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	IEP	HCCA
MF	GO:0004112	cyclic-nucleotide phosphodiesterase activity	IEP	HCCA
MF	GO:0004114	3',5'-cyclic-nucleotide phosphodiesterase activity	IEP	HCCA
MF	GO:0004115	3',5'-cyclic-AMP phosphodiesterase activity	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
BP	GO:0006195	purine nucleotide catabolic process	IEP	HCCA
BP	GO:0006198	cAMP catabolic process	IEP	HCCA
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	HCCA
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	HCCA
MF	GO:0008172	S-methyltransferase activity	IEP	HCCA
CC	GO:0008290	F-actin capping protein complex	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009154	purine ribonucleotide catabolic process	IEP	HCCA
BP	GO:0009166	nucleotide catabolic process	IEP	HCCA
BP	GO:0009187	cyclic nucleotide metabolic process	IEP	HCCA
BP	GO:0009214	cyclic nucleotide catabolic process	IEP	HCCA
BP	GO:0009261	ribonucleotide catabolic process	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0010639	negative regulation of organelle organization	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
BP	GO:0030832	regulation of actin filament length	IEP	HCCA
BP	GO:0030833	regulation of actin filament polymerization	IEP	HCCA
BP	GO:0030834	regulation of actin filament depolymerization	IEP	HCCA
BP	GO:0030835	negative regulation of actin filament depolymerization	IEP	HCCA
BP	GO:0030837	negative regulation of actin filament polymerization	IEP	HCCA
BP	GO:0031333	negative regulation of protein-containing complex assembly	IEP	HCCA
BP	GO:0032271	regulation of protein polymerization	IEP	HCCA
BP	GO:0032272	negative regulation of protein polymerization	IEP	HCCA
BP	GO:0032535	regulation of cellular component size	IEP	HCCA
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	HCCA
BP	GO:0032970	regulation of actin filament-based process	IEP	HCCA
BP	GO:0033043	regulation of organelle organization	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
MF	GO:0042085	5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity	IEP	HCCA
BP	GO:0043242	negative regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043254	regulation of protein-containing complex assembly	IEP	HCCA
BP	GO:0044087	regulation of cellular component biogenesis	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0046058	cAMP metabolic process	IEP	HCCA
BP	GO:0046434	organophosphate catabolic process	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
BP	GO:0051016	barbed-end actin filament capping	IEP	HCCA
MF	GO:0051087	protein-folding chaperone binding	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051129	negative regulation of cellular component organization	IEP	HCCA
BP	GO:0051493	regulation of cytoskeleton organization	IEP	HCCA
BP	GO:0051494	negative regulation of cytoskeleton organization	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0051693	actin filament capping	IEP	HCCA
MF	GO:0051920	peroxiredoxin activity	IEP	HCCA
BP	GO:0052652	cyclic purine nucleotide metabolic process	IEP	HCCA
MF	GO:0060590	ATPase regulator activity	IEP	HCCA
BP	GO:0065008	regulation of biological quality	IEP	HCCA
MF	GO:0071949	FAD binding	IEP	HCCA
BP	GO:0072523	purine-containing compound catabolic process	IEP	HCCA
BP	GO:0090066	regulation of anatomical structure size	IEP	HCCA
BP	GO:0110053	regulation of actin filament organization	IEP	HCCA
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	HCCA
BP	GO:1901292	nucleoside phosphate catabolic process	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
BP	GO:1901879	regulation of protein depolymerization	IEP	HCCA
BP	GO:1901880	negative regulation of protein depolymerization	IEP	HCCA
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	HCCA
BP	GO:1902904	negative regulation of supramolecular fiber organization	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000529	Ribosomal_S6	113	211

External Links

No external refs found!

FUDINGDABAI20212

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation