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  3. Camellia sinensis var. sinensis cv. 'Fuding Dabaicha'
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  5. FUDINGDABAI20990

FUDINGDABAI20990


Description : U11/U12 small nuclear ribonucleoprotein 65 kDa protein & original description: none


Gene families : OG0006573 (OrthoFinder) Phylogenetic Tree(s): OG0006573_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: FUDINGDABAI20990
Cluster HCCA: Cluster_297

Target Alias Description ECC score Gene Family Method Actions
TIEGUANYIN22358 No alias U11/U12 small nuclear ribonucleoprotein 65 kDa protein... 0.03 OrthoFinder
TIEGUANYIN22358 No alias U11/U12 small nuclear ribonucleoprotein 65 kDa protein... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000921 septin ring assembly IEP HCCA
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0004127 cytidylate kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005940 septin ring IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0009378 four-way junction helicase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0019079 viral genome replication IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0031106 septin ring organization IEP HCCA
CC GO:0032156 septin cytoskeleton IEP HCCA
BP GO:0032185 septin cytoskeleton organization IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050145 nucleoside monophosphate kinase activity IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071824 protein-DNA complex organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 37 102
IPR000504 RRM_dom 392 464
No external refs found!