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  3. Camellia sinensis var. sinensis cv. 'Fuding Dabaicha'
  4. Sequence
  5. FUDINGDABAI25730

FUDINGDABAI25730 (HCF136)


Aliases : HCF136

Description : Photosystem II stability/assembly factor HCF136, chloroplastic & original description: none


Gene families : OG0018720 (OrthoFinder) Phylogenetic Tree(s): OG0018720_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: FUDINGDABAI25730
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA34515 HCF136 Photosystem II stability/assembly factor HCF136,... 0.06 OrthoFinder
CSA025997.1 CSA025997, HCF136 Photosystem II stability/assembly factor HCF136,... 0.16 OrthoFinder
ECHA27167 HCF136 Photosystem II stability/assembly factor HCF136,... 0.04 OrthoFinder
GWHTACFB006881 HCF136 Photosystem II stability/assembly factor HCF136,... 0.04 OrthoFinder
GWHTAZTZ034380 HCF136 Photosystem II stability/assembly factor HCF136,... 0.08 OrthoFinder
HUANGJINYA26861 HCF136 Photosystem II stability/assembly factor HCF136,... 0.07 OrthoFinder
JINXUAN31051 HCF136 Photosystem II stability/assembly factor HCF136,... 0.13 OrthoFinder
LJCHANGYE32509 HCF136 Photosystem II stability/assembly factor HCF136,... 0.11 OrthoFinder
TIEGUANYIN17952 HCF136 Photosystem II stability/assembly factor HCF136,... 0.12 OrthoFinder
ZHONGCHA28453 HCF136 Photosystem II stability/assembly factor HCF136,... 0.02 OrthoFinder
ZIJUAN29676 HCF136 Photosystem II stability/assembly factor HCF136,... 0.08 OrthoFinder
ANJIBAICHA34515 HCF136 Photosystem II stability/assembly factor HCF136,... 0.06 OrthoFinder
CSA025997.1 CSA025997, HCF136 Photosystem II stability/assembly factor HCF136,... 0.16 OrthoFinder
CSS0012805.1 CSS0012805, HCF136 Photosystem II stability/assembly factor HCF136,... 0.14 OrthoFinder
ECHA27167 HCF136 Photosystem II stability/assembly factor HCF136,... 0.04 OrthoFinder
GWHTACFB006881 HCF136 Photosystem II stability/assembly factor HCF136,... 0.04 OrthoFinder
GWHTAZTZ034380 HCF136 Photosystem II stability/assembly factor HCF136,... 0.08 OrthoFinder
HUANGJINYA26861 HCF136 Photosystem II stability/assembly factor HCF136,... 0.07 OrthoFinder
JINXUAN31051 HCF136 Photosystem II stability/assembly factor HCF136,... 0.13 OrthoFinder
LJCHANGYE32509 HCF136 Photosystem II stability/assembly factor HCF136,... 0.11 OrthoFinder
TIEGUANYIN17952 HCF136 Photosystem II stability/assembly factor HCF136,... 0.12 OrthoFinder
ZHONGCHA28453 HCF136 Photosystem II stability/assembly factor HCF136,... 0.02 OrthoFinder
ZIJUAN29676 HCF136 Photosystem II stability/assembly factor HCF136,... 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0008290 F-actin capping protein complex IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0016987 sigma factor activity IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0030835 negative regulation of actin filament depolymerization IEP HCCA
BP GO:0030837 negative regulation of actin filament polymerization IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042157 lipoprotein metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0051016 barbed-end actin filament capping IEP HCCA
MF GO:0051087 protein-folding chaperone binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051693 actin filament capping IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901880 negative regulation of protein depolymerization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR028203 PSII_CF48-like_dom 82 403
No external refs found!