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  3. Camellia sinensis var. sinensis cv. 'Fuding Dabaicha'
  4. Sequence
  5. FUDINGDABAI26569

FUDINGDABAI26569


Description : ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic & original description: none


Gene families : OG0022342 (OrthoFinder) Phylogenetic Tree(s): OG0022342_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: FUDINGDABAI26569
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA35570 No alias ATP-dependent Clp protease ATP-binding subunit CLPT2,... 0.03 OrthoFinder
CSA002837.1 CSA002837 ATP-dependent Clp protease ATP-binding subunit CLPT2,... 0.08 OrthoFinder
GWHTACFB005859 No alias ATP-dependent Clp protease ATP-binding subunit CLPT2,... 0.06 OrthoFinder
GWHTAZTZ036154 No alias ATP-dependent Clp protease ATP-binding subunit CLPT2,... 0.03 OrthoFinder
HUANGJINYA26576 No alias ATP-dependent Clp protease ATP-binding subunit CLPT2,... 0.03 OrthoFinder
JINXUAN31209 No alias ATP-dependent Clp protease ATP-binding subunit CLPT2,... 0.06 OrthoFinder
LJCHANGYE31461 No alias ATP-dependent Clp protease ATP-binding subunit CLPT2,... 0.09 OrthoFinder
ANJIBAICHA35570 No alias ATP-dependent Clp protease ATP-binding subunit CLPT2,... 0.03 OrthoFinder
CSA002837.1 CSA002837 ATP-dependent Clp protease ATP-binding subunit CLPT2,... 0.08 OrthoFinder
GWHTACFB005859 No alias ATP-dependent Clp protease ATP-binding subunit CLPT2,... 0.06 OrthoFinder
GWHTAZTZ036154 No alias ATP-dependent Clp protease ATP-binding subunit CLPT2,... 0.03 OrthoFinder
HUANGJINYA26576 No alias ATP-dependent Clp protease ATP-binding subunit CLPT2,... 0.03 OrthoFinder
JINXUAN31209 No alias ATP-dependent Clp protease ATP-binding subunit CLPT2,... 0.06 OrthoFinder
LJCHANGYE31461 No alias ATP-dependent Clp protease ATP-binding subunit CLPT2,... 0.09 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006361 transcription initiation at RNA polymerase I promoter IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0048511 rhythmic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140223 general transcription initiation factor activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004176 Clp_R_dom 109 158
IPR004176 Clp_R_dom 194 230
No external refs found!