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  3. Camellia sinensis var. sinensis cv. 'Fuding Dabaicha'
  4. Sequence
  5. FUDINGDABAI30498

FUDINGDABAI30498


Description : Cytochrome c biogenesis protein CCS1, chloroplastic & original description: none


Gene families : OG0014789 (OrthoFinder) Phylogenetic Tree(s): OG0014789_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: FUDINGDABAI30498
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
CSA017722.1 CSA017722 Cytochrome c biogenesis protein CCS1, chloroplastic &... 0.02 OrthoFinder
GWHTACFB016384 No alias Cytochrome c biogenesis protein CCS1, chloroplastic &... 0.06 OrthoFinder
GWHTAZTZ012313 No alias Cytochrome c biogenesis protein CCS1, chloroplastic &... 0.04 OrthoFinder
TIEGUANYIN21740 No alias Cytochrome c biogenesis protein CCS1, chloroplastic &... 0.03 OrthoFinder
ZIJUAN35650 No alias Cytochrome c biogenesis protein CCS1, chloroplastic &... 0.05 OrthoFinder
CSA017722.1 CSA017722 Cytochrome c biogenesis protein CCS1, chloroplastic &... 0.02 OrthoFinder
CSS0002132.1 CSS0002132 Cytochrome c biogenesis protein CCS1, chloroplastic &... 0.03 OrthoFinder
GWHTACFB016384 No alias Cytochrome c biogenesis protein CCS1, chloroplastic &... 0.06 OrthoFinder
GWHTAZTZ012313 No alias Cytochrome c biogenesis protein CCS1, chloroplastic &... 0.04 OrthoFinder
TIEGUANYIN21740 No alias Cytochrome c biogenesis protein CCS1, chloroplastic &... 0.03 OrthoFinder
ZIJUAN35650 No alias Cytochrome c biogenesis protein CCS1, chloroplastic &... 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0015049 methane monooxygenase activity IEP HCCA
BP GO:0015947 methane metabolic process IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043446 cellular alkane metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007816 ResB-like_domain 126 388
IPR007816 ResB-like_domain 424 537
No external refs found!