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  3. Camellia sinensis var. sinensis cv. 'Fuding Dabaicha'
  4. Sequence
  5. FUDINGDABAI33942

FUDINGDABAI33942 (RPS17, CS17, PRPS17)


Aliases : RPS17, CS17, PRPS17

Description : 30S ribosomal protein S17, chloroplastic & original description: none


Gene families : OG0015084 (OrthoFinder) Phylogenetic Tree(s): OG0015084_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: FUDINGDABAI33942
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
GWHTACFB010755 RPS17, CS17, PRPS17 30S ribosomal protein S17, chloroplastic & original... 0.15 OrthoFinder
GWHTAZTZ041987 RPS17, CS17, PRPS17 30S ribosomal protein S17, chloroplastic & original... 0.1 OrthoFinder
HUANGJINYA34543 RPS17, PRPS17, CS17 30S ribosomal protein S17, chloroplastic & original... 0.09 OrthoFinder
JINXUAN39883 RPS17, CS17, PRPS17 30S ribosomal protein S17, chloroplastic & original... 0.07 OrthoFinder
TIEGUANYIN25080 RPS17, CS17, PRPS17 30S ribosomal protein S17, chloroplastic & original... 0.09 OrthoFinder
ZHONGCHA35746 RPS17, CS17, PRPS17 30S ribosomal protein S17, chloroplastic & original... 0.08 OrthoFinder
CSS0016455.1 CSS0016455,... 30S ribosomal protein S17, chloroplastic & original... 0.07 OrthoFinder
GWHTACFB010755 RPS17, CS17, PRPS17 30S ribosomal protein S17, chloroplastic & original... 0.15 OrthoFinder
GWHTAZTZ041987 RPS17, CS17, PRPS17 30S ribosomal protein S17, chloroplastic & original... 0.1 OrthoFinder
HUANGJINYA34543 RPS17, PRPS17, CS17 30S ribosomal protein S17, chloroplastic & original... 0.09 OrthoFinder
JINXUAN39883 RPS17, CS17, PRPS17 30S ribosomal protein S17, chloroplastic & original... 0.07 OrthoFinder
TIEGUANYIN25080 RPS17, CS17, PRPS17 30S ribosomal protein S17, chloroplastic & original... 0.09 OrthoFinder
ZHONGCHA35746 RPS17, CS17, PRPS17 30S ribosomal protein S17, chloroplastic & original... 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
CC GO:0008290 F-actin capping protein complex IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0030835 negative regulation of actin filament depolymerization IEP HCCA
BP GO:0030837 negative regulation of actin filament polymerization IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051016 barbed-end actin filament capping IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051693 actin filament capping IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901880 negative regulation of protein depolymerization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 63 127
No external refs found!