1. Home
  2. Species
  3. Camellia sinensis var. sinensis cv. 'Fuding Dabaicha'
  4. Sequence
  5. FUDINGDABAI35840

FUDINGDABAI35840 (NFC04, FVE, ATMSI4,...)


Aliases : NFC04, FVE, ATMSI4, MSI4, NFC4, ACG1

Description : WD-40 repeat-containing protein MSI4 & original description: none


Gene families : OG0022671 (OrthoFinder) Phylogenetic Tree(s): OG0022671_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: FUDINGDABAI35840
Cluster HCCA: Cluster_331

Target Alias Description ECC score Gene Family Method Actions
HUANGJINYA35311 NFC04, MSI4,... WD-40 repeat-containing protein MSI4 & original... 0.03 OrthoFinder
JINXUAN40654 NFC04, MSI4,... WD-40 repeat-containing protein MSI4 & original... 0.08 OrthoFinder
LJCHANGYE41572 NFC04, MSI4,... WD-40 repeat-containing protein MSI4 & original... 0.03 OrthoFinder
ZHONGCHA37353 NFC04, MSI4,... WD-40 repeat-containing protein MSI4 & original... 0.06 OrthoFinder
HUANGJINYA35311 NFC04, MSI4,... WD-40 repeat-containing protein MSI4 & original... 0.03 OrthoFinder
JINXUAN40654 NFC04, MSI4,... WD-40 repeat-containing protein MSI4 & original... 0.08 OrthoFinder
LJCHANGYE41572 NFC04, MSI4,... WD-40 repeat-containing protein MSI4 & original... 0.03 OrthoFinder
ZHONGCHA37353 NFC04, MSI4,... WD-40 repeat-containing protein MSI4 & original... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0010835 regulation of protein ADP-ribosylation IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
BP GO:0019076 viral release from host cell IEP HCCA
BP GO:0032801 receptor catabolic process IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
CC GO:0033644 host cell membrane IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0035891 exit from host cell IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0043112 receptor metabolic process IEP HCCA
BP GO:0044000 movement in host IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051701 biological process involved in interaction with host IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 229 261
IPR001680 WD40_repeat 111 145
IPR001680 WD40_repeat 273 310
IPR001680 WD40_repeat 181 216
No external refs found!