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  5. FUDINGDABAI39120

FUDINGDABAI39120 (PEP)


Aliases : PEP

Description : RNA-binding KH domain-containing protein PEPPER & original description: none


Gene families : OG0020007 (OrthoFinder) Phylogenetic Tree(s): OG0020007_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: FUDINGDABAI39120
Cluster HCCA: Cluster_482

Target Alias Description ECC score Gene Family Method Actions
TIEGUANYIN28748 PEP RNA-binding KH domain-containing protein PEPPER &... 0.05 OrthoFinder
CSS0007821.1 CSS0007821, PEP RNA-binding KH domain-containing protein PEPPER &... 0.12 OrthoFinder
TIEGUANYIN28748 PEP RNA-binding KH domain-containing protein PEPPER &... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
CC GO:0031469 bacterial microcompartment IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004803 transposase activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006313 DNA transposition IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0032196 transposition IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 172 238
IPR004088 KH_dom_type_1 346 409
IPR004088 KH_dom_type_1 81 133
No external refs found!