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  3. Camellia sinensis var. sinensis cv. 'Fuding Dabaicha'
  4. Sequence
  5. FUDINGDABAI40670

FUDINGDABAI40670


Description : DEAD-box ATP-dependent RNA helicase 16 & original description: none


Gene families : OG0012332 (OrthoFinder) Phylogenetic Tree(s): OG0012332_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: FUDINGDABAI40670
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
CSA012166.1 CSA012166 DEAD-box ATP-dependent RNA helicase 16 & original... 0.07 OrthoFinder
GWHTACFB014778 No alias DEAD-box ATP-dependent RNA helicase 16 & original... 0.05 OrthoFinder
GWHTAZTZ004468 No alias DEAD-box ATP-dependent RNA helicase 16 & original... 0.05 OrthoFinder
HUANGJINYA38179 No alias DEAD-box ATP-dependent RNA helicase 16 & original... 0.06 OrthoFinder
JINXUAN44482 No alias DEAD-box ATP-dependent RNA helicase 16 & original... 0.03 OrthoFinder
LJCHANGYE46936 No alias DEAD-box ATP-dependent RNA helicase 16 & original... 0.04 OrthoFinder
TIEGUANYIN29627 No alias DEAD-box ATP-dependent RNA helicase 16 & original... 0.11 OrthoFinder
ZHONGCHA40143 No alias DEAD-box ATP-dependent RNA helicase 16 & original... 0.03 OrthoFinder
CSA012166.1 CSA012166 DEAD-box ATP-dependent RNA helicase 16 & original... 0.07 OrthoFinder
CSS0045534.1 CSS0045534 DEAD-box ATP-dependent RNA helicase 16 & original... 0.05 OrthoFinder
GWHTACFB014778 No alias DEAD-box ATP-dependent RNA helicase 16 & original... 0.05 OrthoFinder
GWHTAZTZ004468 No alias DEAD-box ATP-dependent RNA helicase 16 & original... 0.05 OrthoFinder
HUANGJINYA38179 No alias DEAD-box ATP-dependent RNA helicase 16 & original... 0.06 OrthoFinder
JINXUAN44482 No alias DEAD-box ATP-dependent RNA helicase 16 & original... 0.03 OrthoFinder
LJCHANGYE46936 No alias DEAD-box ATP-dependent RNA helicase 16 & original... 0.04 OrthoFinder
TIEGUANYIN29627 No alias DEAD-box ATP-dependent RNA helicase 16 & original... 0.11 OrthoFinder
ZHONGCHA40143 No alias DEAD-box ATP-dependent RNA helicase 16 & original... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005102 signaling receptor binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005217 intracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005219 ryanodine-sensitive calcium-release channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005262 calcium channel activity IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006361 transcription initiation at RNA polymerase I promoter IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006873 intracellular monoatomic ion homeostasis IEP HCCA
BP GO:0006874 intracellular calcium ion homeostasis IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0015085 calcium ion transmembrane transporter activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0015278 calcium-release channel activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016151 nickel cation binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0030003 intracellular monoatomic cation homeostasis IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 intracellular chemical homeostasis IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
MF GO:0099094 ligand-gated monoatomic cation channel activity IEP HCCA
MF GO:0099604 ligand-gated calcium channel activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140223 general transcription initiation factor activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 264 406
IPR011545 DEAD/DEAH_box_helicase_dom 48 225
No external refs found!