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  3. Camellia sinensis var. sinensis cv. 'Fuding Dabaicha'
  4. Sequence
  5. FUDINGDABAI44695

FUDINGDABAI44695


Description : Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic & original description: none


Gene families : OG0015546 (OrthoFinder) Phylogenetic Tree(s): OG0015546_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: FUDINGDABAI44695
Cluster HCCA: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA52706 No alias Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic... 0.02 OrthoFinder
GWHTAZTZ003707 No alias Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic... 0.02 OrthoFinder
HUANGJINYA43478 No alias Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic... 0.05 OrthoFinder
JINXUAN47107 No alias Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic... 0.02 OrthoFinder
TIEGUANYIN33417 No alias Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic... 0.02 OrthoFinder
ZIJUAN28707 No alias Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic... 0.05 OrthoFinder
ANJIBAICHA52706 No alias Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic... 0.02 OrthoFinder
CSS0042583.1 CSS0042583 Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic... 0.03 OrthoFinder
CSS0048025.1 CSS0048025 Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic... 0.05 OrthoFinder
GWHTAZTZ003707 No alias Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic... 0.02 OrthoFinder
HUANGJINYA43478 No alias Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic... 0.05 OrthoFinder
JINXUAN47107 No alias Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic... 0.02 OrthoFinder
TIEGUANYIN33417 No alias Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic... 0.02 OrthoFinder
ZIJUAN28707 No alias Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic... 0.05 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000372 Group I intron splicing IEP HCCA
BP GO:0000376 RNA splicing, via transesterification reactions with guanosine as nucleophile IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003688 DNA replication origin binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005811 lipid droplet IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032780 negative regulation of ATP-dependent activity IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0042555 MCM complex IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043462 regulation of ATP-dependent activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
BP GO:0051095 regulation of helicase activity IEP HCCA
BP GO:0051097 negative regulation of helicase activity IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140612 DNA damage sensor activity IEP HCCA
MF GO:0140664 ATP-dependent DNA damage sensor activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1905462 regulation of DNA duplex unwinding IEP HCCA
BP GO:1905463 negative regulation of DNA duplex unwinding IEP HCCA
BP GO:1905774 regulation of DNA helicase activity IEP HCCA
BP GO:1905775 negative regulation of DNA helicase activity IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
BP GO:2001251 negative regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 195 215
IPR002885 Pentatricopeptide_repeat 236 264
IPR002885 Pentatricopeptide_repeat 267 311
No external refs found!