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  3. Camellia sinensis var. sinensis cv. 'Fuding Dabaicha'
  4. Sequence
  5. FUDINGDABAI49048

FUDINGDABAI49048


Description : no annotation & original description: none


Gene families : OG0006691 (OrthoFinder) Phylogenetic Tree(s): OG0006691_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: FUDINGDABAI49048
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
GWHTAZTZ007429 No alias no annotation & original description: Protein=GWHPAZTZ007429 0.03 OrthoFinder
JINXUAN54728 No alias no annotation & original description: none 0.03 OrthoFinder
LJCHANGYE57159 No alias no annotation & original description: none 0.03 OrthoFinder
ZHONGCHA48889 No alias no annotation & original description: none 0.1 OrthoFinder
ZIJUAN44064 No alias no annotation & original description: none 0.13 OrthoFinder
CSS0034094.1 CSS0034094 no annotation & original description: gene=CSS0034094 0.07 OrthoFinder
GWHTAZTZ007429 No alias no annotation & original description: Protein=GWHPAZTZ007429 0.03 OrthoFinder
JINXUAN54728 No alias no annotation & original description: none 0.03 OrthoFinder
LJCHANGYE57159 No alias no annotation & original description: none 0.03 OrthoFinder
ZHONGCHA48889 No alias no annotation & original description: none 0.1 OrthoFinder
ZIJUAN44064 No alias no annotation & original description: none 0.13 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006364 rRNA processing IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
BP GO:0032259 methylation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003873 6-phosphofructo-2-kinase activity IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006000 fructose metabolic process IEP HCCA
BP GO:0006376 mRNA splice site recognition IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019072 viral genome packaging IEP HCCA
BP GO:0019073 viral DNA genome packaging IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP HCCA
BP GO:0022618 protein-RNA complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
CC GO:0030684 preribosome IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071826 protein-RNA complex organization IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002877 RNA_MeTrfase_FtsJ_dom 22 199
IPR024576 rRNA_MeTfrase_Spb1_DUF3381 235 386
IPR012920 rRNA_MeTfrase_SPB1-like_C 617 815
No external refs found!