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  3. Camellia sinensis var. sinensis cv. 'Fuding Dabaicha'
  4. Sequence
  5. FUDINGDABAI51433

FUDINGDABAI51433 (GATB)


Aliases : GATB

Description : Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial & original description: none


Gene families : OG0009657 (OrthoFinder) Phylogenetic Tree(s): OG0009657_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: FUDINGDABAI51433
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA63756 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.06 OrthoFinder
CSA035150.1 CSA035150, GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.02 OrthoFinder
GWHTAZTZ027198 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.03 OrthoFinder
HUANGJINYA52982 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.05 OrthoFinder
TIEGUANYIN40902 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.08 OrthoFinder
ZHONGCHA54772 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.02 OrthoFinder
ZIJUAN12770 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.02 OrthoFinder
ANJIBAICHA63756 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.06 OrthoFinder
CSA035150.1 CSA035150, GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.02 OrthoFinder
CSS0041578.1 CSS0041578, GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.03 OrthoFinder
CSS0049189.1 CSS0049189, GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.07 OrthoFinder
GWHTAZTZ027198 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.03 OrthoFinder
HUANGJINYA52982 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.05 OrthoFinder
TIEGUANYIN40902 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.08 OrthoFinder
ZHONGCHA54772 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.02 OrthoFinder
ZIJUAN12770 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016874 ligase activity IEA Interproscan
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0001070 RNA-binding transcription regulator activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004520 DNA endonuclease activity IEP HCCA
MF GO:0004536 DNA nuclease activity IEP HCCA
MF GO:0004549 tRNA-specific ribonuclease activity IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0009036 type II site-specific deoxyribonuclease activity IEP HCCA
BP GO:0009307 DNA restriction-modification system IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0015666 restriction endodeoxyribonuclease activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016892 RNA endonuclease activity, producing 3'-phosphomonoesters IEP HCCA
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044355 clearance of foreign intracellular DNA IEP HCCA
BP GO:0046782 regulation of viral transcription IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048524 positive regulation of viral process IEP HCCA
BP GO:0050434 positive regulation of viral transcription IEP HCCA
BP GO:0050792 regulation of viral process IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:0099046 clearance of foreign intracellular nucleic acids IEP HCCA
InterPro domains Description Start Stop
IPR018027 Asn/Gln_amidotransferase 395 542
IPR006075 Asn/Gln-tRNA_Trfase_suB/E_cat 69 356
No external refs found!