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  3. Camellia sinensis var. sinensis cv. 'Fuding Dabaicha'
  4. Sequence
  5. FUDINGDABAI57799

FUDINGDABAI57799 (LSH4)


Aliases : LSH4

Description : Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 & original description: none


Gene families : OG0013079 (OrthoFinder) Phylogenetic Tree(s): OG0013079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: FUDINGDABAI57799
Cluster HCCA: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
ECHA63774 LSH4 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 & original... 0.04 OrthoFinder
HUANGJINYA56050 LSH4 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 & original... 0.04 OrthoFinder
ZHONGCHA58075 LSH4 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 & original... 0.06 OrthoFinder
ECHA63774 LSH4 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 & original... 0.04 OrthoFinder
HUANGJINYA56050 LSH4 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 & original... 0.04 OrthoFinder
ZHONGCHA58075 LSH4 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 & original... 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004879 nuclear receptor activity IEP HCCA
MF GO:0005496 steroid binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0030518 intracellular steroid hormone receptor signaling pathway IEP HCCA
BP GO:0030521 androgen receptor signaling pathway IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043401 steroid hormone mediated signaling pathway IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0098531 ligand-activated transcription factor activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006936 ALOG_dom 44 162
No external refs found!