1. Home
  2. Species
  3. Camellia sinensis var. sinensis cv. 'Fuding Dabaicha'
  4. Sequence
  5. FUDINGDABAI58048

FUDINGDABAI58048 (ROC4)


Aliases : ROC4

Description : Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic & original description: none


Gene families : OG0013092 (OrthoFinder) Phylogenetic Tree(s): OG0013092_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: FUDINGDABAI58048
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
CSA014078.1 CSA014078, ROC4 Peptidyl-prolyl cis-trans isomerase CYP20-3,... 0.05 OrthoFinder
ECHA63866 ROC4 Peptidyl-prolyl cis-trans isomerase CYP20-3,... 0.02 OrthoFinder
GWHTACFB007932 ROC4 Peptidyl-prolyl cis-trans isomerase CYP20-3,... 0.06 OrthoFinder
GWHTAZTZ038228 ROC4 Peptidyl-prolyl cis-trans isomerase CYP20-3,... 0.06 OrthoFinder
HUANGJINYA56777 ROC4 Peptidyl-prolyl cis-trans isomerase CYP20-3,... 0.07 OrthoFinder
JINXUAN64956 ROC4 Peptidyl-prolyl cis-trans isomerase CYP20-3,... 0.05 OrthoFinder
LJCHANGYE65980 ROC4 Peptidyl-prolyl cis-trans isomerase CYP20-3,... 0.09 OrthoFinder
TIEGUANYIN44151 ROC4 Peptidyl-prolyl cis-trans isomerase CYP20-3,... 0.03 OrthoFinder
ZHONGCHA59984 ROC4 Peptidyl-prolyl cis-trans isomerase CYP20-3,... 0.19 OrthoFinder
ZIJUAN26682 ROC4 Peptidyl-prolyl cis-trans isomerase CYP20-3,... 0.09 OrthoFinder
CSA014078.1 CSA014078, ROC4 Peptidyl-prolyl cis-trans isomerase CYP20-3,... 0.05 OrthoFinder
CSS0008668.1 ROC4, CSS0008668 Peptidyl-prolyl cis-trans isomerase CYP20-3,... 0.17 OrthoFinder
ECHA63866 ROC4 Peptidyl-prolyl cis-trans isomerase CYP20-3,... 0.02 OrthoFinder
GWHTACFB007932 ROC4 Peptidyl-prolyl cis-trans isomerase CYP20-3,... 0.06 OrthoFinder
GWHTAZTZ038228 ROC4 Peptidyl-prolyl cis-trans isomerase CYP20-3,... 0.06 OrthoFinder
HUANGJINYA56777 ROC4 Peptidyl-prolyl cis-trans isomerase CYP20-3,... 0.07 OrthoFinder
JINXUAN64956 ROC4 Peptidyl-prolyl cis-trans isomerase CYP20-3,... 0.05 OrthoFinder
LJCHANGYE65980 ROC4 Peptidyl-prolyl cis-trans isomerase CYP20-3,... 0.09 OrthoFinder
TIEGUANYIN44151 ROC4 Peptidyl-prolyl cis-trans isomerase CYP20-3,... 0.03 OrthoFinder
ZHONGCHA59984 ROC4 Peptidyl-prolyl cis-trans isomerase CYP20-3,... 0.19 OrthoFinder
ZIJUAN26682 ROC4 Peptidyl-prolyl cis-trans isomerase CYP20-3,... 0.09 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006480 N-terminal protein amino acid methylation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016987 sigma factor activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 99 254
No external refs found!