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  3. Camellia sinensis var. sinensis cv. 'Huangjinya'
  4. Sequence
  5. HUANGJINYA20956

HUANGJINYA20956


Description : Disease resistance protein RPM1 & original description: none


Gene families : OG0000530 (OrthoFinder) Phylogenetic Tree(s): OG0000530_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: HUANGJINYA20956
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
ECHA02156 No alias no annotation & original description: none 0.04 OrthoFinder
FUDINGDABAI20852 No alias no annotation & original description: none 0.03 OrthoFinder
GWHTAZTZ039898 HRT, RCY1, RPP8 Disease resistance protein RPM1 & original description:... 0.04 OrthoFinder
HUANGJINYA03090 No alias no annotation & original description: none 0.04 OrthoFinder
JINXUAN02042 No alias Disease resistance protein RPM1 & original description: none 0.03 OrthoFinder
LJCHANGYE05238 No alias no annotation & original description: none 0.04 OrthoFinder
LJCHANGYE25642 No alias Disease resistance protein RPM1 & original description: none 0.02 OrthoFinder
LJCHANGYE25643 No alias no annotation & original description: none 0.02 OrthoFinder
TIEGUANYIN06103 No alias Disease resistance protein RPM1 & original description: none 0.03 OrthoFinder
TIEGUANYIN47029 No alias Disease resistance protein RPM1 & original description: none 0.11 OrthoFinder
ZHONGCHA01612 No alias no annotation & original description: none 0.03 OrthoFinder
ZHONGCHA01613 No alias Disease resistance protein RPM1 & original description: none 0.13 OrthoFinder
ZHONGCHA22582 No alias no annotation & original description: none 0.03 OrthoFinder
ZIJUAN35234 No alias Disease resistance protein RPM1 & original description: none 0.06 OrthoFinder
ZIJUAN58154 No alias Disease resistance protein RPM1 & original description: none 0.03 OrthoFinder
ECHA02156 No alias no annotation & original description: none 0.04 OrthoFinder
FUDINGDABAI20852 No alias no annotation & original description: none 0.03 OrthoFinder
GWHTAZTZ039898 HRT, RCY1, RPP8 Disease resistance protein RPM1 & original description:... 0.04 OrthoFinder
HUANGJINYA03090 No alias no annotation & original description: none 0.04 OrthoFinder
JINXUAN02042 No alias Disease resistance protein RPM1 & original description: none 0.03 OrthoFinder
LJCHANGYE05238 No alias no annotation & original description: none 0.04 OrthoFinder
LJCHANGYE25642 No alias Disease resistance protein RPM1 & original description: none 0.02 OrthoFinder
LJCHANGYE25643 No alias no annotation & original description: none 0.02 OrthoFinder
TIEGUANYIN06103 No alias Disease resistance protein RPM1 & original description: none 0.03 OrthoFinder
TIEGUANYIN47029 No alias Disease resistance protein RPM1 & original description: none 0.11 OrthoFinder
ZHONGCHA01612 No alias no annotation & original description: none 0.03 OrthoFinder
ZHONGCHA01613 No alias Disease resistance protein RPM1 & original description: none 0.13 OrthoFinder
ZHONGCHA22582 No alias no annotation & original description: none 0.03 OrthoFinder
ZIJUAN35234 No alias Disease resistance protein RPM1 & original description: none 0.06 OrthoFinder
ZIJUAN58154 No alias Disease resistance protein RPM1 & original description: none 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030123 AP-3 adaptor complex IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031145 anaphase-promoting complex-dependent catabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0097602 cullin family protein binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!