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  3. Camellia sinensis var. sinensis cv. 'Longjing 43'
  4. Sequence
  5. GWHTACFB009174

GWHTACFB009174


Description : RNA-binding NOB1-like protein & original description: Protein=GWHPACFB009174


Gene families : OG0014327 (OrthoFinder) Phylogenetic Tree(s): OG0014327_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GWHTACFB009174
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
FUDINGDABAI17934 No alias RNA-binding NOB1-like protein & original description: none 0.09 OrthoFinder
GWHTAZTZ040536 No alias RNA-binding NOB1-like protein & original description:... 0.1 OrthoFinder
HUANGJINYA20465 No alias RNA-binding NOB1-like protein & original description: none 0.09 OrthoFinder
LJCHANGYE21930 No alias RNA-binding NOB1-like protein & original description: none 0.03 OrthoFinder
TIEGUANYIN12171 No alias RNA-binding NOB1-like protein & original description: none 0.03 OrthoFinder
ZHONGCHA20953 No alias RNA-binding NOB1-like protein & original description: none 0.05 OrthoFinder
ZIJUAN50205 No alias RNA-binding NOB1-like protein & original description: none 0.09 OrthoFinder
CSS0019840.1 CSS0019840 RNA-binding NOB1-like protein & original description:... 0.26 OrthoFinder
FUDINGDABAI17934 No alias RNA-binding NOB1-like protein & original description: none 0.09 OrthoFinder
GWHTAZTZ040536 No alias RNA-binding NOB1-like protein & original description:... 0.1 OrthoFinder
HUANGJINYA20465 No alias RNA-binding NOB1-like protein & original description: none 0.09 OrthoFinder
LJCHANGYE21930 No alias RNA-binding NOB1-like protein & original description: none 0.03 OrthoFinder
TIEGUANYIN12171 No alias RNA-binding NOB1-like protein & original description: none 0.03 OrthoFinder
ZHONGCHA20953 No alias RNA-binding NOB1-like protein & original description: none 0.05 OrthoFinder
ZIJUAN50205 No alias RNA-binding NOB1-like protein & original description: none 0.09 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0018580 nitronate monooxygenase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR033411 Ribonuclease_PIN 53 139
IPR014881 NOB1_Zn-bd 489 559
No external refs found!