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  3. Camellia sinensis var. sinensis cv. 'Longjing 43'
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  5. GWHTACFB009395

GWHTACFB009395


Description : Histone-binding protein MSI1 & original description: Protein=GWHPACFB009395


Gene families : OG0002611 (OrthoFinder) Phylogenetic Tree(s): OG0002611_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GWHTACFB009395
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
CSA014241.1 CSA014241 WD-40 repeat-containing protein MSI2 & original... 0.06 OrthoFinder
FUDINGDABAI38230 No alias Histone-binding protein MSI1 & original description: none 0.04 OrthoFinder
GWHTAZTZ040833 No alias Histone-binding protein MSI1 & original description:... 0.07 OrthoFinder
HUANGJINYA37290 No alias Histone-binding protein MSI1 & original description: none 0.05 OrthoFinder
LJCHANGYE41316 No alias Histone-binding protein MSI1 & original description: none 0.03 OrthoFinder
CSA014241.1 CSA014241 WD-40 repeat-containing protein MSI2 & original... 0.06 OrthoFinder
CSS0005601.1 CSS0005601 Histone-binding protein MSI1 & original description:... 0.21 OrthoFinder
FUDINGDABAI38230 No alias Histone-binding protein MSI1 & original description: none 0.04 OrthoFinder
GWHTAZTZ040833 No alias Histone-binding protein MSI1 & original description:... 0.07 OrthoFinder
HUANGJINYA37290 No alias Histone-binding protein MSI1 & original description: none 0.05 OrthoFinder
LJCHANGYE41316 No alias Histone-binding protein MSI1 & original description: none 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003682 chromatin binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP HCCA
MF GO:0004810 CCA tRNA nucleotidyltransferase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006177 GMP biosynthetic process IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0046037 GMP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022052 Histone-bd_RBBP4_N 49 115
IPR001680 WD40_repeat 354 390
IPR001680 WD40_repeat 266 299
No external refs found!