GWHTACFB013890

Description : Zinc finger CCCH domain-containing protein 67 & original description: Protein=GWHPACFB013890

Gene families : OG0019744 (OrthoFinder) Phylogenetic Tree(s): OG0019744_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GWHTACFB013890
Cluster	HCCA: Cluster_284

Target	Alias	Description	ECC score	Gene Family Method
CSA000229.1	CSA000229	Zinc finger CCCH domain-containing protein 67 &...	0.03	OrthoFinder
ECHA44138	No alias	Zinc finger CCCH domain-containing protein 67 &...	0.03	OrthoFinder
FUDINGDABAI40078	No alias	Zinc finger CCCH domain-containing protein 67 &...	0.02	OrthoFinder
HUANGJINYA36972	No alias	Zinc finger CCCH domain-containing protein 43 &...	0.03	OrthoFinder
LJCHANGYE43411	No alias	Zinc finger CCCH domain-containing protein 67 &...	0.02	OrthoFinder
TIEGUANYIN29770	No alias	Zinc finger CCCH domain-containing protein 67 &...	0.03	OrthoFinder
ZIJUAN10719	No alias	Zinc finger CCCH domain-containing protein 67 &...	0.03	OrthoFinder
CSA000229.1	CSA000229	Zinc finger CCCH domain-containing protein 67 &...	0.03	OrthoFinder
CSS0047511.1	CSS0047511	Zinc finger CCCH domain-containing protein 67 &...	0.03	OrthoFinder
ECHA44138	No alias	Zinc finger CCCH domain-containing protein 67 &...	0.03	OrthoFinder
FUDINGDABAI40078	No alias	Zinc finger CCCH domain-containing protein 67 &...	0.02	OrthoFinder
HUANGJINYA36972	No alias	Zinc finger CCCH domain-containing protein 43 &...	0.03	OrthoFinder
LJCHANGYE43411	No alias	Zinc finger CCCH domain-containing protein 67 &...	0.02	OrthoFinder
TIEGUANYIN29770	No alias	Zinc finger CCCH domain-containing protein 67 &...	0.03	OrthoFinder
ZIJUAN10719	No alias	Zinc finger CCCH domain-containing protein 67 &...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006270	DNA replication initiation	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003729	mRNA binding	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004852	uroporphyrinogen-III synthase activity	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
CC	GO:0005672	transcription factor TFIIA complex	IEP	HCCA
CC	GO:0005681	spliceosomal complex	IEP	HCCA
CC	GO:0005685	U1 snRNP	IEP	HCCA
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
BP	GO:0006354	DNA-templated transcription elongation	IEP	HCCA
BP	GO:0006368	transcription elongation by RNA polymerase II	IEP	HCCA
BP	GO:0006376	mRNA splice site recognition	IEP	HCCA
BP	GO:0006383	transcription by RNA polymerase III	IEP	HCCA
BP	GO:0006553	lysine metabolic process	IEP	HCCA
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006974	DNA damage response	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
CC	GO:0008023	transcription elongation factor complex	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
MF	GO:0008134	transcription factor binding	IEP	HCCA
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	HCCA
MF	GO:0008312	7S RNA binding	IEP	HCCA
MF	GO:0008839	4-hydroxy-tetrahydrodipicolinate reductase	IEP	HCCA
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	HCCA
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009085	lysine biosynthetic process	IEP	HCCA
BP	GO:0009089	lysine biosynthetic process via diaminopimelate	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009235	cobalamin metabolic process	IEP	HCCA
BP	GO:0009236	cobalamin biosynthetic process	IEP	HCCA
BP	GO:0010835	regulation of protein ADP-ribosylation	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0016197	endosomal transport	IEP	HCCA
BP	GO:0016482	cytosolic transport	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
CC	GO:0016593	Cdc73/Paf1 complex	IEP	HCCA
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0017056	structural constituent of nuclear pore	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
MF	GO:0019208	phosphatase regulator activity	IEP	HCCA
MF	GO:0019888	protein phosphatase regulator activity	IEP	HCCA
BP	GO:0022618	protein-RNA complex assembly	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030127	COPII vesicle coat	IEP	HCCA
CC	GO:0030289	protein phosphatase 4 complex	IEP	HCCA
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	HCCA
CC	GO:0030684	preribosome	IEP	HCCA
CC	GO:0030906	retromer, cargo-selective complex	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
CC	GO:0032040	small-subunit processome	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
MF	GO:0042393	histone binding	IEP	HCCA
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046451	diaminopimelate metabolic process	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
CC	GO:0048500	signal recognition particle	IEP	HCCA
BP	GO:0050790	regulation of catalytic activity	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051338	regulation of transferase activity	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
CC	GO:0061617	MICOS complex	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0071826	protein-RNA complex organization	IEP	HCCA
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	HCCA
CC	GO:0097525	spliceosomal snRNP complex	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0120114	Sm-like protein family complex	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
CC	GO:1903293	phosphatase complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000571	Znf_CCCH	495	518
IPR000571	Znf_CCCH	261	286
IPR000571	Znf_CCCH	216	239
IPR000571	Znf_CCCH	446	471
IPR000571	Znf_CCCH	310	334

External Links

No external refs found!

GWHTACFB013890

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation