1. Home
  2. Species
  3. Camellia sinensis var. sinensis cv. 'Longjing 43'
  4. Sequence
  5. GWHTACFB019004

GWHTACFB019004


Description : 40S ribosomal protein S8 & original description: Protein=GWHPACFB019004


Gene families : OG0001433 (OrthoFinder) Phylogenetic Tree(s): OG0001433_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GWHTACFB019004
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA10739 No alias 40S ribosomal protein S8 & original description: none 0.03 OrthoFinder
ANJIBAICHA21785 No alias 40S ribosomal protein S8 & original description: none 0.05 OrthoFinder
ANJIBAICHA63650 No alias 40S ribosomal protein S8 & original description: none 0.03 OrthoFinder
CSA021528.1 CSA021528 40S ribosomal protein S8 & original description: none 0.22 OrthoFinder
CSA021583.1 CSA021583 40S ribosomal protein S8 & original description: none 0.09 OrthoFinder
CSA029097.1 CSA029097 40S ribosomal protein S8 & original description: none 0.13 OrthoFinder
ECHA15841 No alias 40S ribosomal protein S8 & original description: none 0.17 OrthoFinder
FUDINGDABAI00881 No alias 40S ribosomal protein S8 & original description: none 0.06 OrthoFinder
FUDINGDABAI54441 No alias 40S ribosomal protein S8 & original description: none 0.14 OrthoFinder
GWHTAZTZ014370 No alias 40S ribosomal protein S8 & original description:... 0.03 OrthoFinder
GWHTAZTZ021070 No alias 40S ribosomal protein S8 & original description:... 0.11 OrthoFinder
HUANGJINYA00830 No alias 40S ribosomal protein S8 & original description: none 0.09 OrthoFinder
HUANGJINYA13297 No alias 40S ribosomal protein S8 & original description: none 0.22 OrthoFinder
HUANGJINYA53659 No alias 40S ribosomal protein S8 & original description: none 0.19 OrthoFinder
JINXUAN01884 No alias 40S ribosomal protein S8 & original description: none 0.06 OrthoFinder
JINXUAN17111 No alias 40S ribosomal protein S8 & original description: none 0.03 OrthoFinder
LJCHANGYE03772 No alias 40S ribosomal protein S8 & original description: none 0.1 OrthoFinder
LJCHANGYE18648 No alias 40S ribosomal protein S8 & original description: none 0.17 OrthoFinder
LJCHANGYE58876 No alias 40S ribosomal protein S8 & original description: none 0.12 OrthoFinder
TIEGUANYIN16570 No alias 40S ribosomal protein S8 & original description: none 0.07 OrthoFinder
TIEGUANYIN39641 No alias 40S ribosomal protein S8 & original description: none 0.27 OrthoFinder
ZHONGCHA00584 No alias 40S ribosomal protein S8 & original description: none 0.11 OrthoFinder
ZHONGCHA15514 No alias 40S ribosomal protein S8 & original description: none 0.14 OrthoFinder
ZHONGCHA56666 No alias 40S ribosomal protein S8 & original description: none 0.19 OrthoFinder
ZIJUAN09362 No alias 40S ribosomal protein S8 & original description: none 0.15 OrthoFinder
ZIJUAN10198 No alias 40S ribosomal protein S8 & original description: none 0.18 OrthoFinder
ZIJUAN15582 No alias 40S ribosomal protein S8 & original description: none 0.12 OrthoFinder
ANJIBAICHA10739 No alias 40S ribosomal protein S8 & original description: none 0.03 OrthoFinder
ANJIBAICHA21785 No alias 40S ribosomal protein S8 & original description: none 0.05 OrthoFinder
ANJIBAICHA63650 No alias 40S ribosomal protein S8 & original description: none 0.03 OrthoFinder
CSA021528.1 CSA021528 40S ribosomal protein S8 & original description: none 0.22 OrthoFinder
CSA021583.1 CSA021583 40S ribosomal protein S8 & original description: none 0.09 OrthoFinder
CSA029097.1 CSA029097 40S ribosomal protein S8 & original description: none 0.13 OrthoFinder
CSS0009381.1 CSS0009381 40S ribosomal protein S8 & original description: gene=CSS0009381 0.17 OrthoFinder
CSS0021816.1 CSS0021816 40S ribosomal protein S8 & original description: gene=CSS0021816 0.08 OrthoFinder
CSS0026393.1 CSS0026393 40S ribosomal protein S8 & original description: gene=CSS0026393 0.08 OrthoFinder
CSS0045353.1 CSS0045353 40S ribosomal protein S8 & original description: gene=CSS0045353 0.19 OrthoFinder
ECHA15841 No alias 40S ribosomal protein S8 & original description: none 0.17 OrthoFinder
FUDINGDABAI00881 No alias 40S ribosomal protein S8 & original description: none 0.06 OrthoFinder
FUDINGDABAI54441 No alias 40S ribosomal protein S8 & original description: none 0.14 OrthoFinder
GWHTAZTZ014370 No alias 40S ribosomal protein S8 & original description:... 0.03 OrthoFinder
GWHTAZTZ021070 No alias 40S ribosomal protein S8 & original description:... 0.11 OrthoFinder
HUANGJINYA00830 No alias 40S ribosomal protein S8 & original description: none 0.09 OrthoFinder
HUANGJINYA13297 No alias 40S ribosomal protein S8 & original description: none 0.22 OrthoFinder
HUANGJINYA53659 No alias 40S ribosomal protein S8 & original description: none 0.19 OrthoFinder
JINXUAN01884 No alias 40S ribosomal protein S8 & original description: none 0.06 OrthoFinder
JINXUAN17111 No alias 40S ribosomal protein S8 & original description: none 0.03 OrthoFinder
LJCHANGYE03772 No alias 40S ribosomal protein S8 & original description: none 0.1 OrthoFinder
LJCHANGYE18648 No alias 40S ribosomal protein S8 & original description: none 0.17 OrthoFinder
LJCHANGYE58876 No alias 40S ribosomal protein S8 & original description: none 0.12 OrthoFinder
TIEGUANYIN16570 No alias 40S ribosomal protein S8 & original description: none 0.07 OrthoFinder
TIEGUANYIN39641 No alias 40S ribosomal protein S8 & original description: none 0.27 OrthoFinder
ZHONGCHA00584 No alias 40S ribosomal protein S8 & original description: none 0.11 OrthoFinder
ZHONGCHA15514 No alias 40S ribosomal protein S8 & original description: none 0.14 OrthoFinder
ZHONGCHA56666 No alias 40S ribosomal protein S8 & original description: none 0.19 OrthoFinder
ZIJUAN09362 No alias 40S ribosomal protein S8 & original description: none 0.15 OrthoFinder
ZIJUAN10198 No alias 40S ribosomal protein S8 & original description: none 0.18 OrthoFinder
ZIJUAN15582 No alias 40S ribosomal protein S8 & original description: none 0.12 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000315 organellar large ribosomal subunit IEP HCCA
BP GO:0000387 spliceosomal snRNP assembly IEP HCCA
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003951 NAD+ kinase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005762 mitochondrial large ribosomal subunit IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006361 transcription initiation at RNA polymerase I promoter IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009235 cobalamin metabolic process IEP HCCA
BP GO:0009236 cobalamin biosynthetic process IEP HCCA
BP GO:0009399 nitrogen fixation IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP HCCA
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP HCCA
MF GO:0016987 sigma factor activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0022618 protein-RNA complex assembly IEP HCCA
BP GO:0030029 actin filament-based process IEP HCCA
BP GO:0030036 actin cytoskeleton organization IEP HCCA
CC GO:0030289 protein phosphatase 4 complex IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
CC GO:0030684 preribosome IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
BP GO:0030866 cortical actin cytoskeleton organization IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071826 protein-RNA complex organization IEP HCCA
BP GO:0071941 nitrogen cycle metabolic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140223 general transcription initiation factor activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR022309 Ribosomal_S8e/biogenesis_NSA2 1 197
No external refs found!