GWHTACFB031506 (EMB2296)

Aliases : EMB2296

Description : 60S ribosomal protein L8 & original description: Protein=GWHPACFB031506

Gene families : OG0003657 (OrthoFinder) Phylogenetic Tree(s): OG0003657_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GWHTACFB031506
Cluster	HCCA: Cluster_232

Target	Alias	Description	ECC score	Gene Family Method
CSA003220.1	EMB2296, CSA003220	60S ribosomal protein L8 & original description: none	0.08	OrthoFinder
FUDINGDABAI16079	EMB2296	60S ribosomal protein L8 & original description: none	0.07	OrthoFinder
FUDINGDABAI60579	EMB2296	60S ribosomal protein L8 & original description: none	0.11	OrthoFinder
GWHTAZTZ021239	EMB2296	60S ribosomal protein L8 & original description:...	0.12	OrthoFinder
HUANGJINYA01969	EMB2296	60S ribosomal protein L8 & original description: none	0.04	OrthoFinder
HUANGJINYA14941	EMB2296	60S ribosomal protein L8 & original description: none	0.05	OrthoFinder
JINXUAN15967	EMB2296	60S ribosomal protein L8 & original description: none	0.05	OrthoFinder
LJCHANGYE04501	EMB2296	60S ribosomal protein L8 & original description: none	0.04	OrthoFinder
TIEGUANYIN08689	EMB2296	60S ribosomal protein L8 & original description: none	0.09	OrthoFinder
TIEGUANYIN47704	EMB2296	60S ribosomal protein L8 & original description: none	0.09	OrthoFinder
ZHONGCHA03693	EMB2296	60S ribosomal protein L8 & original description: none	0.03	OrthoFinder
ZHONGCHA17185	EMB2296	60S ribosomal protein L8 & original description: none	0.03	OrthoFinder
CSA003220.1	EMB2296, CSA003220	60S ribosomal protein L8 & original description: none	0.08	OrthoFinder
CSS0005345.1	CSS0005345, EMB2296	60S ribosomal protein L8 & original description: gene=CSS0005345	0.17	OrthoFinder
CSS0048258.1	CSS0048258, EMB2296	60S ribosomal protein L8 & original description: gene=CSS0048258	0.06	OrthoFinder
FUDINGDABAI16079	EMB2296	60S ribosomal protein L8 & original description: none	0.07	OrthoFinder
FUDINGDABAI60579	EMB2296	60S ribosomal protein L8 & original description: none	0.11	OrthoFinder
GWHTAZTZ021239	EMB2296	60S ribosomal protein L8 & original description:...	0.12	OrthoFinder
HUANGJINYA01969	EMB2296	60S ribosomal protein L8 & original description: none	0.04	OrthoFinder
HUANGJINYA14941	EMB2296	60S ribosomal protein L8 & original description: none	0.05	OrthoFinder
JINXUAN15967	EMB2296	60S ribosomal protein L8 & original description: none	0.05	OrthoFinder
LJCHANGYE04501	EMB2296	60S ribosomal protein L8 & original description: none	0.04	OrthoFinder
TIEGUANYIN08689	EMB2296	60S ribosomal protein L8 & original description: none	0.09	OrthoFinder
TIEGUANYIN47704	EMB2296	60S ribosomal protein L8 & original description: none	0.09	OrthoFinder
ZHONGCHA03693	EMB2296	60S ribosomal protein L8 & original description: none	0.03	OrthoFinder
ZHONGCHA17185	EMB2296	60S ribosomal protein L8 & original description: none	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	IEP	HCCA
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
BP	GO:0006213	pyrimidine nucleoside metabolic process	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
MF	GO:0008175	tRNA methyltransferase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0009116	nucleoside metabolic process	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016426	tRNA (adenine) methyltransferase activity	IEP	HCCA
MF	GO:0016429	tRNA (adenine-N1-)-methyltransferase activity	IEP	HCCA
MF	GO:0016763	pentosyltransferase activity	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
BP	GO:0030488	tRNA methylation	IEP	HCCA
CC	GO:0031515	tRNA (m1A) methyltransferase complex	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
CC	GO:0034708	methyltransferase complex	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
CC	GO:0043527	tRNA methyltransferase complex	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
BP	GO:1901657	glycosyl compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022666	Rbsml_prot_L2_RNA-bd_dom	13	89
IPR022669	Ribosomal_L2_C	98	224

External Links

No external refs found!

GWHTACFB031506 (EMB2296)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation