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  3. Camellia sinensis var. sinensis cv. 'Longjing Changye'
  4. Sequence
  5. LJCHANGYE01347

LJCHANGYE01347 (RPN1A, ATRPN1A)


Aliases : RPN1A, ATRPN1A

Description : 26S proteasome non-ATPase regulatory subunit 2 homolog B & original description: none


Gene families : OG0009738 (OrthoFinder) Phylogenetic Tree(s): OG0009738_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LJCHANGYE01347
Cluster HCCA: Cluster_432

Target Alias Description ECC score Gene Family Method Actions
FUDINGDABAI59216 RPN1A, ATRPN1A 26S proteasome non-ATPase regulatory subunit 2 homolog... 0.03 OrthoFinder
GWHTACFB003029 RPN1A, ATRPN1A 26S proteasome non-ATPase regulatory subunit 2 homolog... 0.04 OrthoFinder
JINXUAN66039 RPN1A, ATRPN1A 26S proteasome non-ATPase regulatory subunit 2 homolog... 0.03 OrthoFinder
TIEGUANYIN44964 RPN1A, ATRPN1A 26S proteasome non-ATPase regulatory subunit 2 homolog... 0.04 OrthoFinder
ZHONGCHA00121 RPN1A, ATRPN1A 26S proteasome non-ATPase regulatory subunit 2 homolog... 0.03 OrthoFinder
FUDINGDABAI59216 RPN1A, ATRPN1A 26S proteasome non-ATPase regulatory subunit 2 homolog... 0.03 OrthoFinder
GWHTACFB003029 RPN1A, ATRPN1A 26S proteasome non-ATPase regulatory subunit 2 homolog... 0.04 OrthoFinder
JINXUAN66039 RPN1A, ATRPN1A 26S proteasome non-ATPase regulatory subunit 2 homolog... 0.03 OrthoFinder
TIEGUANYIN44964 RPN1A, ATRPN1A 26S proteasome non-ATPase regulatory subunit 2 homolog... 0.04 OrthoFinder
ZHONGCHA00121 RPN1A, ATRPN1A 26S proteasome non-ATPase regulatory subunit 2 homolog... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000372 Group I intron splicing IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000376 RNA splicing, via transesterification reactions with guanosine as nucleophile IEP HCCA
CC GO:0005819 spindle IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
CC GO:0042729 DASH complex IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
CC GO:0072686 mitotic spindle IEP HCCA

No InterPro domains available for this sequence

No external refs found!