1. Home
  2. Species
  3. Camellia sinensis var. sinensis cv. 'Longjing Changye'
  4. Sequence
  5. LJCHANGYE19858

LJCHANGYE19858


Description : Thylakoid lumenal 17.4 kDa protein, chloroplastic & original description: none


Gene families : OG0014128 (OrthoFinder) Phylogenetic Tree(s): OG0014128_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LJCHANGYE19858
Cluster HCCA: Cluster_310

Target Alias Description ECC score Gene Family Method Actions
TIEGUANYIN09838 No alias Thylakoid lumenal 17.4 kDa protein, chloroplastic &... 0.04 OrthoFinder
ZHONGCHA15923 No alias Thylakoid lumenal 17.4 kDa protein, chloroplastic &... 0.03 OrthoFinder
TIEGUANYIN09838 No alias Thylakoid lumenal 17.4 kDa protein, chloroplastic &... 0.04 OrthoFinder
ZHONGCHA15923 No alias Thylakoid lumenal 17.4 kDa protein, chloroplastic &... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP HCCA
BP GO:0010275 NAD(P)H dehydrogenase complex assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016151 nickel cation binding IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 132 168
IPR001646 5peptide_repeat 170 208
No external refs found!