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  3. Camellia sinensis var. sinensis cv. 'Longjing Changye'
  4. Sequence
  5. LJCHANGYE27723

LJCHANGYE27723


Description : rRNA biogenesis protein RRP5 & original description: none


Gene families : OG0002835 (OrthoFinder) Phylogenetic Tree(s): OG0002835_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LJCHANGYE27723
Cluster HCCA: Cluster_437

Target Alias Description ECC score Gene Family Method Actions
FUDINGDABAI53469 No alias rRNA biogenesis protein RRP5 & original description: none 0.07 OrthoFinder
JINXUAN27515 No alias rRNA biogenesis protein RRP5 & original description: none 0.07 OrthoFinder
TIEGUANYIN15036 No alias rRNA biogenesis protein RRP5 & original description: none 0.06 OrthoFinder
FUDINGDABAI53469 No alias rRNA biogenesis protein RRP5 & original description: none 0.07 OrthoFinder
JINXUAN27515 No alias rRNA biogenesis protein RRP5 & original description: none 0.07 OrthoFinder
TIEGUANYIN15036 No alias rRNA biogenesis protein RRP5 & original description: none 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0005942 phosphatidylinositol 3-kinase complex IEP HCCA
CC GO:0005944 phosphatidylinositol 3-kinase complex, class IB IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0035014 phosphatidylinositol 3-kinase regulator activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046935 1-phosphatidylinositol-3-kinase regulator activity IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:0097651 phosphatidylinositol 3-kinase complex, class I IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 328 375
IPR003029 S1_domain 30 87
No external refs found!