LJCHANGYE41896


Description : Probable ribose-5-phosphate isomerase 4, chloroplastic & original description: none


Gene families : OG0003133 (OrthoFinder) Phylogenetic Tree(s): OG0003133_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LJCHANGYE41896
Cluster HCCA: Cluster_310

Target Alias Description ECC score Gene Family Method Actions
FUDINGDABAI36129 No alias Probable ribose-5-phosphate isomerase 4, chloroplastic... 0.04 OrthoFinder
GWHTACFB021477 No alias Probable ribose-5-phosphate isomerase 4, chloroplastic... 0.04 OrthoFinder
ZIJUAN42351 No alias Probable ribose-5-phosphate isomerase 4, chloroplastic... 0.03 OrthoFinder
ZIJUAN42353 No alias Probable ribose-5-phosphate isomerase 4, chloroplastic... 0.04 OrthoFinder
CSS0019604.1 CSS0019604 Probable ribose-5-phosphate isomerase 4, chloroplastic... 0.05 OrthoFinder
FUDINGDABAI36129 No alias Probable ribose-5-phosphate isomerase 4, chloroplastic... 0.04 OrthoFinder
GWHTACFB021477 No alias Probable ribose-5-phosphate isomerase 4, chloroplastic... 0.04 OrthoFinder
ZIJUAN42351 No alias Probable ribose-5-phosphate isomerase 4, chloroplastic... 0.03 OrthoFinder
ZIJUAN42353 No alias Probable ribose-5-phosphate isomerase 4, chloroplastic... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEA Interproscan
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004549 tRNA-specific ribonuclease activity IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016892 RNA endonuclease activity, producing 3'-phosphomonoesters IEP HCCA
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR004788 Ribose5P_isomerase_type_A 102 179
No external refs found!