Description : Probable ribose-5-phosphate isomerase 4, chloroplastic & original description: none
Gene families : OG0003133 (OrthoFinder) Phylogenetic Tree(s): OG0003133_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LJCHANGYE41896 | |
Cluster | HCCA: Cluster_310 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
FUDINGDABAI36129 | No alias | Probable ribose-5-phosphate isomerase 4, chloroplastic... | 0.04 | OrthoFinder | |
GWHTACFB021477 | No alias | Probable ribose-5-phosphate isomerase 4, chloroplastic... | 0.04 | OrthoFinder | |
ZIJUAN42351 | No alias | Probable ribose-5-phosphate isomerase 4, chloroplastic... | 0.03 | OrthoFinder | |
ZIJUAN42353 | No alias | Probable ribose-5-phosphate isomerase 4, chloroplastic... | 0.04 | OrthoFinder | |
CSS0019604.1 | CSS0019604 | Probable ribose-5-phosphate isomerase 4, chloroplastic... | 0.05 | OrthoFinder | |
FUDINGDABAI36129 | No alias | Probable ribose-5-phosphate isomerase 4, chloroplastic... | 0.04 | OrthoFinder | |
GWHTACFB021477 | No alias | Probable ribose-5-phosphate isomerase 4, chloroplastic... | 0.04 | OrthoFinder | |
ZIJUAN42351 | No alias | Probable ribose-5-phosphate isomerase 4, chloroplastic... | 0.03 | OrthoFinder | |
ZIJUAN42353 | No alias | Probable ribose-5-phosphate isomerase 4, chloroplastic... | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEA | Interproscan |
BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000213 | tRNA-intron endonuclease activity | IEP | HCCA |
BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | HCCA |
BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
CC | GO:0009512 | cytochrome b6f complex | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0016892 | RNA endonuclease activity, producing 3'-phosphomonoesters | IEP | HCCA |
MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | HCCA |
CC | GO:0070069 | cytochrome complex | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004788 | Ribose5P_isomerase_type_A | 102 | 179 |
No external refs found! |