LJCHANGYE49721 (NPQ1, AVDE1)


Aliases : NPQ1, AVDE1

Description : Violaxanthin de-epoxidase, chloroplastic & original description: none


Gene families : OG0012403 (OrthoFinder) Phylogenetic Tree(s): OG0012403_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LJCHANGYE49721
Cluster HCCA: Cluster_310

Target Alias Description ECC score Gene Family Method Actions
CSA036357.1 CSA036357, NPQ1, AVDE1 Violaxanthin de-epoxidase, chloroplastic & original... 0.03 OrthoFinder
CSA036357.1 CSA036357, NPQ1, AVDE1 Violaxanthin de-epoxidase, chloroplastic & original... 0.03 OrthoFinder
CSS0006565.1 AVDE1, NPQ1, CSS0006565 Violaxanthin de-epoxidase, chloroplastic & original... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0046422 violaxanthin de-epoxidase activity IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0001534 radial spoke IEP HCCA
BP GO:0003341 cilium movement IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008384 IkappaB kinase activity IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0030030 cell projection organization IEP HCCA
BP GO:0030031 cell projection assembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031412 gas vesicle organization IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044782 cilium organization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0060271 cilium assembly IEP HCCA
BP GO:0060294 cilium movement involved in cell motility IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0120031 plasma membrane bounded cell projection assembly IEP HCCA
BP GO:0120036 plasma membrane bounded cell projection organization IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010788 VDE_dom 138 378
No external refs found!