1. Home
  2. Species
  3. Camellia sinensis var. sinensis cv. 'Longjing Changye'
  4. Sequence
  5. LJCHANGYE58463

LJCHANGYE58463


Description : 50S ribosomal protein L28, chloroplastic & original description: none


Gene families : OG0016323 (OrthoFinder) Phylogenetic Tree(s): OG0016323_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LJCHANGYE58463
Cluster HCCA: Cluster_310

Target Alias Description ECC score Gene Family Method Actions
FUDINGDABAI51426 No alias 50S ribosomal protein L28, chloroplastic & original... 0.03 OrthoFinder
GWHTACFB026114 No alias 50S ribosomal protein L28, chloroplastic & original... 0.06 OrthoFinder
HUANGJINYA51694 No alias 50S ribosomal protein L28, chloroplastic & original... 0.03 OrthoFinder
TIEGUANYIN40962 No alias 50S ribosomal protein L28, chloroplastic & original... 0.05 OrthoFinder
ZHONGCHA55326 No alias 50S ribosomal protein L28, chloroplastic & original... 0.07 OrthoFinder
ZIJUAN38636 No alias 50S ribosomal protein L28, chloroplastic & original... 0.03 OrthoFinder
CSS0007771.1 CSS0007771 50S ribosomal protein L28, chloroplastic & original... 0.03 OrthoFinder
FUDINGDABAI51426 No alias 50S ribosomal protein L28, chloroplastic & original... 0.03 OrthoFinder
GWHTACFB026114 No alias 50S ribosomal protein L28, chloroplastic & original... 0.06 OrthoFinder
HUANGJINYA51694 No alias 50S ribosomal protein L28, chloroplastic & original... 0.03 OrthoFinder
TIEGUANYIN40962 No alias 50S ribosomal protein L28, chloroplastic & original... 0.05 OrthoFinder
ZHONGCHA55326 No alias 50S ribosomal protein L28, chloroplastic & original... 0.07 OrthoFinder
ZIJUAN38636 No alias 50S ribosomal protein L28, chloroplastic & original... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003873 6-phosphofructo-2-kinase activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006000 fructose metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016151 nickel cation binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0048511 rhythmic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR026569 Ribo_L28/L24 82 140
No external refs found!