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  5. CSS0018474.1

CSS0018474.1 (CSS0018474, CRK8)


Aliases : CSS0018474, CRK8

Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 & original description: gene=CSS0018474


Gene families : OG0000385 (OrthoFinder) Phylogenetic Tree(s): OG0000385_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CSS0018474.1

Target Alias Description ECC score Gene Family Method Actions
CSA026381.1 CSA026381, CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.06 OrthoFinder
FUDINGDABAI15528 No alias Uncharacterized mitochondrial protein AtMg00820 &... 0.09 OrthoFinder
FUDINGDABAI29169 No alias Uncharacterized mitochondrial protein AtMg00820 &... 0.14 OrthoFinder
FUDINGDABAI59838 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 OrthoFinder
JINXUAN31116 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.4 OrthoFinder
LJCHANGYE55950 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.09 OrthoFinder
ZHONGCHA50563 No alias no annotation & original description: none 0.12 OrthoFinder
ZIJUAN29025 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR013103 RVT_2 168 224
IPR013103 RVT_2 234 295
No external refs found!