CSS0019557.1 (CSS0019557)

Aliases : CSS0019557

Description : 40S ribosomal protein S12 & original description: gene=CSS0019557

Gene families : OG0002996 (OrthoFinder) Phylogenetic Tree(s): OG0002996_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CSS0019557.1

Target	Alias	Description	ECC score	Gene Family Method
ANJIBAICHA11903	No alias	40S ribosomal protein S12 & original description: none	0.14	OrthoFinder
CSA013803.1	CSA013803	40S ribosomal protein S12 & original description: none	0.04	OrthoFinder
CSA030434.1	CSA030434	40S ribosomal protein S12 & original description: none	0.16	OrthoFinder
CSA033673.1	CSA033673	40S ribosomal protein S12 & original description: none	0.11	OrthoFinder
CSS0026119.1	CSS0026119	40S ribosomal protein S12 & original description:...	0.08	OrthoFinder
ECHA03490	No alias	40S ribosomal protein S12 & original description: none	0.07	OrthoFinder
ECHA06774	No alias	40S ribosomal protein S12 & original description: none	0.03	OrthoFinder
FUDINGDABAI03484	No alias	40S ribosomal protein S12 & original description: none	0.29	OrthoFinder
FUDINGDABAI06986	No alias	40S ribosomal protein S12 & original description: none	0.04	OrthoFinder
GWHTACFB013744	No alias	40S ribosomal protein S12 & original description:...	0.22	OrthoFinder
GWHTACFB019379	No alias	40S ribosomal protein S12 & original description:...	0.03	OrthoFinder
HUANGJINYA03991	No alias	40S ribosomal protein S12 & original description: none	0.14	OrthoFinder
HUANGJINYA07626	No alias	40S ribosomal protein S12 & original description: none	0.14	OrthoFinder
JINXUAN04892	No alias	40S ribosomal protein S12 & original description: none	0.28	OrthoFinder
JINXUAN10245	No alias	40S ribosomal protein S12 & original description: none	0.05	OrthoFinder
LJCHANGYE06792	No alias	40S ribosomal protein S12 & original description: none	0.06	OrthoFinder
TIEGUANYIN01985	No alias	40S ribosomal protein S12 & original description: none	0.03	OrthoFinder
TIEGUANYIN25356	No alias	40S ribosomal protein S12 & original description: none	0.23	OrthoFinder
ZHONGCHA04928	No alias	40S ribosomal protein S12 & original description: none	0.29	OrthoFinder
ZHONGCHA07768	No alias	40S ribosomal protein S12 & original description: none	0.23	OrthoFinder
ZIJUAN24869	No alias	40S ribosomal protein S12 & original description: none	0.1	OrthoFinder
ZIJUAN40221	No alias	40S ribosomal protein S12 & original description: none	0.04	OrthoFinder
ZIJUAN53081	No alias	40S ribosomal protein S12 & original description: none	0.06	OrthoFinder

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

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Type	GO Term	Name	Evidence	Source
BP	GO:0000387	spliceosomal snRNP assembly	IEP	HCCA
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0019048	modulation by virus of host process	IEP	HCCA
BP	GO:0019054	modulation by virus of host cellular process	IEP	HCCA
BP	GO:0019056	modulation by virus of host transcription	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
BP	GO:0022618	protein-RNA complex assembly	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0035821	modulation of process of another organism	IEP	HCCA
BP	GO:0039653	suppression by virus of host transcription	IEP	HCCA
BP	GO:0039656	modulation by virus of host gene expression	IEP	HCCA
BP	GO:0039657	suppression by virus of host gene expression	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044003	modulation by symbiont of host process	IEP	HCCA
BP	GO:0044068	modulation by symbiont of host cellular process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0052026	modulation by symbiont of host transcription	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0071826	protein-RNA complex organization	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
MF	GO:2001070	starch binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004038	Ribosomal_L7Ae/L30e/S12e/Gad45	30	123

External Links

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CSS0019557.1 (CSS0019557)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation