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  5. CSS0019604.1

CSS0019604.1 (CSS0019604)


Aliases : CSS0019604

Description : Probable ribose-5-phosphate isomerase 4, chloroplastic & original description: gene=CSS0019604


Gene families : OG0003133 (OrthoFinder) Phylogenetic Tree(s): OG0003133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CSS0019604.1

Target Alias Description ECC score Gene Family Method Actions
CSA010881.1 CSA010881 Probable ribose-5-phosphate isomerase 4, chloroplastic... 0.04 OrthoFinder
FUDINGDABAI36129 No alias Probable ribose-5-phosphate isomerase 4, chloroplastic... 0.11 OrthoFinder
GWHTACFB021477 No alias Probable ribose-5-phosphate isomerase 4, chloroplastic... 0.12 OrthoFinder
GWHTAZTZ026133 No alias Probable ribose-5-phosphate isomerase 4, chloroplastic... 0.08 OrthoFinder
LJCHANGYE41896 No alias Probable ribose-5-phosphate isomerase 4, chloroplastic... 0.05 OrthoFinder
ZIJUAN42353 No alias Probable ribose-5-phosphate isomerase 4, chloroplastic... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEA Interproscan
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
InterPro domains Description Start Stop
IPR004788 Ribose5P_isomerase_type_A 18 189
No external refs found!