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  5. CSS0022378.1

CSS0022378.1 (CSS0022378)


Aliases : CSS0022378

Description : 30S ribosomal protein S6 alpha, chloroplastic & original description: gene=CSS0022378


Gene families : OG0004748 (OrthoFinder) Phylogenetic Tree(s): OG0004748_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CSS0022378.1

Target Alias Description ECC score Gene Family Method Actions
CSS0040137.1 CSS0040137 30S ribosomal protein S6 alpha, chloroplastic &... 0.12 OrthoFinder
FUDINGDABAI20212 No alias 30S ribosomal protein S6 alpha, chloroplastic &... 0.07 OrthoFinder
JINXUAN22468 No alias 30S ribosomal protein S6 alpha, chloroplastic &... 0.05 OrthoFinder
LJCHANGYE22858 No alias 30S ribosomal protein S6 alpha, chloroplastic &... 0.04 OrthoFinder
ZHONGCHA19601 No alias 30S ribosomal protein S6 alpha, chloroplastic &... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
BP GO:0007130 synaptonemal complex assembly IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0007276 gamete generation IEP HCCA
BP GO:0007283 spermatogenesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016987 sigma factor activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0048232 male gamete generation IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0070193 synaptonemal complex organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR000529 Ribosomal_S6 113 203
No external refs found!