CSS0033440.1 (CSS0033440, FUS1,...)

Aliases : CSS0033440, FUS1, EMB168, DET340, ATCOP1, COP1

Description : E3 ubiquitin-protein ligase COP1 & original description: gene=CSS0033440

Gene families : OG0002192 (OrthoFinder) Phylogenetic Tree(s): OG0002192_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CSS0033440.1

Target	Alias	Description	ECC score	Gene Family Method
FUDINGDABAI60271	FUS1, EMB168,...	E3 ubiquitin-protein ligase COP1 & original description: none	0.07	OrthoFinder
GWHTACFB018509	FUS1, EMB168,...	E3 ubiquitin-protein ligase COP1 & original...	0.03	OrthoFinder
JINXUAN03431	FUS1, EMB168,...	E3 ubiquitin-protein ligase COP1 & original description: none	0.02	OrthoFinder
TIEGUANYIN47599	FUS1, EMB168,...	E3 ubiquitin-protein ligase COP1 & original description: none	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
CC	GO:0019028	viral capsid	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044423	virion component	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	Interproscan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004345	glucose-6-phosphate dehydrogenase activity	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
MF	GO:0030151	molybdenum ion binding	IEP	HCCA
MF	GO:0035299	inositol pentakisphosphate 2-kinase activity	IEP	HCCA
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	HCCA
MF	GO:0043021	ribonucleoprotein complex binding	IEP	HCCA
MF	GO:0043022	ribosome binding	IEP	HCCA
BP	GO:0071586	CAAX-box protein processing	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	454	491
IPR001680	WD40_repeat	540	576

External Links

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CSS0033440.1 (CSS0033440, FUS1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation