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  5. CSS0039433.1

CSS0039433.1 (IRX6, COBL4, CSS0039433)


Aliases : IRX6, COBL4, CSS0039433

Description : COBRA-like protein 4 & original description: gene=CSS0039433


Gene families : OG0001878 (OrthoFinder) Phylogenetic Tree(s): OG0001878_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CSS0039433.1

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA48999 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.03 OrthoFinder
CSA006325.1 CSA006325, IRX6, COBL4 COBRA-like protein 4 & original description: none 0.06 OrthoFinder
CSS0012272.1 COBL4, IRX6, CSS0012272 COBRA-like protein 4 & original description: gene=CSS0012272 0.02 OrthoFinder
ECHA42720 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.03 OrthoFinder
ECHA44019 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.02 OrthoFinder
ECHA47220 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.05 OrthoFinder
FUDINGDABAI36693 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.14 OrthoFinder
FUDINGDABAI40198 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.04 OrthoFinder
FUDINGDABAI41637 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.05 OrthoFinder
GWHTACFB014144 IRX6, COBL4 COBRA-like protein 4 & original description:... 0.1 OrthoFinder
GWHTAZTZ003332 IRX6, COBL4 COBRA-like protein 4 & original description:... 0.03 OrthoFinder
GWHTAZTZ005307 IRX6, COBL4 COBRA-like protein 4 & original description:... 0.03 OrthoFinder
HUANGJINYA36168 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.05 OrthoFinder
HUANGJINYA36759 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.09 OrthoFinder
HUANGJINYA42936 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.07 OrthoFinder
JINXUAN44890 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.11 OrthoFinder
JINXUAN48729 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.07 OrthoFinder
LJCHANGYE49947 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.03 OrthoFinder
TIEGUANYIN29018 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.04 OrthoFinder
TIEGUANYIN34171 COBL4, IRX6 COBRA-like protein 4 & original description: none 0.08 OrthoFinder
ZHONGCHA45094 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.13 OrthoFinder
ZIJUAN36302 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP HCCA
CC GO:0000139 Golgi membrane IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004520 DNA endonuclease activity IEP HCCA
MF GO:0004536 DNA nuclease activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 DNA damage response IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008484 sulfuric ester hydrolase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019954 asexual reproduction IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0030436 asexual sporulation IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043934 sporulation IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006918 COBRA_pln 43 206
No external refs found!