CSS0044508.1 (CSS0044508)

Aliases : CSS0044508

Description : Nuclear pore complex protein NUP50A & original description: gene=CSS0044508

Gene families : OG0019870 (OrthoFinder) Phylogenetic Tree(s): OG0019870_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CSS0044508.1

Target	Alias	Description	ECC score	Gene Family Method
GWHTACFB013638	No alias	Nuclear pore complex protein NUP50A & original...	0.04	OrthoFinder
HUANGJINYA39185	No alias	Nuclear pore complex protein NUP50A & original description: none	0.06	OrthoFinder
JINXUAN42076	No alias	Nuclear pore complex protein NUP50A & original description: none	0.07	OrthoFinder
LJCHANGYE46802	No alias	Nuclear pore complex protein NUP50A & original description: none	0.03	OrthoFinder
ZHONGCHA42380	No alias	Nuclear pore complex protein NUP50A & original description: none	0.09	OrthoFinder
ZIJUAN34093	No alias	Nuclear pore complex protein NUP50A & original description: none	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004190	aspartic-type endopeptidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005643	nuclear pore	IEA	Interproscan
CC	GO:0005789	endoplasmic reticulum membrane	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
CC	GO:0008287	protein serine/threonine phosphatase complex	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016485	protein processing	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0019208	phosphatase regulator activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019888	protein phosphatase regulator activity	IEA	Interproscan
BP	GO:0023041	neuronal signal transduction	IEA	Interproscan
MF	GO:0030234	enzyme regulator activity	None	Extended
CC	GO:0030289	protein phosphatase 4 complex	IEA	Interproscan
CC	GO:0030867	rough endoplasmic reticulum membrane	IEA	Interproscan
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046907	intracellular transport	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051604	protein maturation	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0070001	aspartic-type peptidase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1903293	phosphatase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000221	vacuolar proton-transporting V-type ATPase, V1 domain	IEP	HCCA
CC	GO:0000315	organellar large ribosomal subunit	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
CC	GO:0005762	mitochondrial large ribosomal subunit	IEP	HCCA
BP	GO:0006606	protein import into nucleus	IEP	HCCA
BP	GO:0006913	nucleocytoplasmic transport	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
BP	GO:0022618	protein-RNA complex assembly	IEP	HCCA
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	HCCA
CC	GO:0033180	proton-transporting V-type ATPase, V1 domain	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0034504	protein localization to nucleus	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
BP	GO:0051169	nuclear transport	IEP	HCCA
BP	GO:0051170	import into nucleus	IEP	HCCA
MF	GO:0061608	nuclear import signal receptor activity	IEP	HCCA
MF	GO:0070034	telomerase RNA binding	IEP	HCCA
BP	GO:0071826	protein-RNA complex organization	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
MF	GO:0140104	molecular carrier activity	IEP	HCCA
MF	GO:0140142	nucleocytoplasmic carrier activity	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA
BP	GO:1904868	telomerase catalytic core complex assembly	IEP	HCCA
BP	GO:1905323	telomerase holoenzyme complex assembly	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000156	Ran_bind_dom	272	387
IPR015007	NUP2/50/61	13	73

External Links

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CSS0044508.1 (CSS0044508)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation