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  5. CSS0048233.1

CSS0048233.1 (CSS0048233)


Aliases : CSS0048233

Description : 30S ribosomal protein S6 alpha, chloroplastic & original description: gene=CSS0048233


Gene families : OG0004748 (OrthoFinder) Phylogenetic Tree(s): OG0004748_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CSS0048233.1

Target Alias Description ECC score Gene Family Method Actions
CSS0038140.1 CSS0038140 30S ribosomal protein S6 alpha, chloroplastic &... 0.03 OrthoFinder
CSS0040137.1 CSS0040137 30S ribosomal protein S6 alpha, chloroplastic &... 0.1 OrthoFinder
FUDINGDABAI20212 No alias 30S ribosomal protein S6 alpha, chloroplastic &... 0.07 OrthoFinder
ZHONGCHA19601 No alias 30S ribosomal protein S6 alpha, chloroplastic &... 0.13 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0001897 cytolysis by symbiont of host cells IEP HCCA
BP GO:0001907 killing by symbiont of host cells IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP HCCA
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP HCCA
MF GO:0004115 3',5'-cyclic-AMP phosphodiesterase activity IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006195 purine nucleotide catabolic process IEP HCCA
BP GO:0006198 cAMP catabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0007130 synaptonemal complex assembly IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0007276 gamete generation IEP HCCA
BP GO:0007283 spermatogenesis IEP HCCA
BP GO:0007339 binding of sperm to zona pellucida IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0009154 purine ribonucleotide catabolic process IEP HCCA
BP GO:0009166 nucleotide catabolic process IEP HCCA
BP GO:0009187 cyclic nucleotide metabolic process IEP HCCA
BP GO:0009214 cyclic nucleotide catabolic process IEP HCCA
BP GO:0009261 ribonucleotide catabolic process IEP HCCA
BP GO:0009988 cell-cell recognition IEP HCCA
BP GO:0010024 phytochromobilin biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019836 hemolysis by symbiont of host erythrocytes IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0035036 sperm-egg recognition IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046058 cAMP metabolic process IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0048232 male gamete generation IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
MF GO:0050897 cobalt ion binding IEP HCCA
BP GO:0051202 phytochromobilin metabolic process IEP HCCA
MF GO:0051743 red chlorophyll catabolite reductase activity IEP HCCA
BP GO:0052652 cyclic purine nucleotide metabolic process IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0070193 synaptonemal complex organization IEP HCCA
BP GO:0072523 purine-containing compound catabolic process IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR000529 Ribosomal_S6 113 203
No external refs found!