CSS0049238.1 (CSS0049238, FUS1,...)

Aliases : CSS0049238, FUS1, EMB168, DET340, ATCOP1, COP1

Description : E3 ubiquitin-protein ligase COP1 & original description: gene=CSS0049238

Gene families : OG0002192 (OrthoFinder) Phylogenetic Tree(s): OG0002192_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CSS0049238.1

Target	Alias	Description	ECC score	Gene Family Method
CSA030817.1	CSA030817, COP1,...	E3 ubiquitin-protein ligase COP1 & original description: none	0.07	OrthoFinder
FUDINGDABAI60271	FUS1, EMB168,...	E3 ubiquitin-protein ligase COP1 & original description: none	0.04	OrthoFinder
TIEGUANYIN47599	FUS1, EMB168,...	E3 ubiquitin-protein ligase COP1 & original description: none	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	Interproscan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0030246	carbohydrate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	425	462
IPR001680	WD40_repeat	511	547

External Links

No external refs found!

CSS0049238.1 (CSS0049238, FUS1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation