ZHONGCHA02233 (FTSH12, EMB36, EMB156, EMB1047)


Aliases : FTSH12, EMB36, EMB156, EMB1047

Description : ATP-dependent zinc metalloprotease FTSH 12, chloroplastic & original description: none


Gene families : OG0013275 (OrthoFinder) Phylogenetic Tree(s): OG0013275_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ZHONGCHA02233
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
CSA023935.1 FTSH12,... ATP-dependent zinc metalloprotease FTSH 12,... 0.06 OrthoFinder
CSA023936.1 CSA023936,... ATP-dependent zinc metalloprotease FTSH 12,... 0.04 OrthoFinder
ECHA00244 FTSH12, EMB36,... ATP-dependent zinc metalloprotease FTSH 12,... 0.03 OrthoFinder
FUDINGDABAI60616 FTSH12, EMB36,... ATP-dependent zinc metalloprotease FTSH 12,... 0.1 OrthoFinder
GWHTACFB019168 FTSH12, EMB36,... ATP-dependent zinc metalloprotease FTSH 12,... 0.08 OrthoFinder
GWHTAZTZ014161 FTSH12, EMB36,... ATP-dependent zinc metalloprotease FTSH 12,... 0.12 OrthoFinder
HUANGJINYA01561 FTSH12, EMB36,... ATP-dependent zinc metalloprotease FTSH 12,... 0.03 OrthoFinder
JINXUAN01151 FTSH12, EMB36,... ATP-dependent zinc metalloprotease FTSH 12,... 0.1 OrthoFinder
LJCHANGYE03002 FTSH12, EMB36,... ATP-dependent zinc metalloprotease FTSH 12,... 0.07 OrthoFinder
TIEGUANYIN46460 FTSH12, EMB36,... ATP-dependent zinc metalloprotease FTSH 12,... 0.09 OrthoFinder
ZIJUAN31739 FTSH12, EMB36,... ATP-dependent zinc metalloprotease FTSH 12,... 0.08 OrthoFinder
CSA023935.1 FTSH12,... ATP-dependent zinc metalloprotease FTSH 12,... 0.06 OrthoFinder
CSA023936.1 CSA023936,... ATP-dependent zinc metalloprotease FTSH 12,... 0.04 OrthoFinder
CSS0042976.1 CSS0042976,... ATP-dependent zinc metalloprotease FTSH 12,... 0.28 OrthoFinder
ECHA00244 FTSH12, EMB36,... ATP-dependent zinc metalloprotease FTSH 12,... 0.03 OrthoFinder
FUDINGDABAI60616 FTSH12, EMB36,... ATP-dependent zinc metalloprotease FTSH 12,... 0.1 OrthoFinder
GWHTACFB019168 FTSH12, EMB36,... ATP-dependent zinc metalloprotease FTSH 12,... 0.08 OrthoFinder
GWHTAZTZ014161 FTSH12, EMB36,... ATP-dependent zinc metalloprotease FTSH 12,... 0.12 OrthoFinder
HUANGJINYA01561 FTSH12, EMB36,... ATP-dependent zinc metalloprotease FTSH 12,... 0.03 OrthoFinder
JINXUAN01151 FTSH12, EMB36,... ATP-dependent zinc metalloprotease FTSH 12,... 0.1 OrthoFinder
LJCHANGYE03002 FTSH12, EMB36,... ATP-dependent zinc metalloprotease FTSH 12,... 0.07 OrthoFinder
TIEGUANYIN46460 FTSH12, EMB36,... ATP-dependent zinc metalloprotease FTSH 12,... 0.09 OrthoFinder
ZIJUAN31739 FTSH12, EMB36,... ATP-dependent zinc metalloprotease FTSH 12,... 0.08 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003724 RNA helicase activity IEA Interproscan
MF GO:0004176 ATP-dependent peptidase activity IEA Interproscan
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
BP GO:0006310 DNA recombination IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008134 transcription factor binding IEA Interproscan
MF GO:0009378 four-way junction helicase activity IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP HCCA
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP HCCA
MF GO:0004115 3',5'-cyclic-AMP phosphodiesterase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006195 purine nucleotide catabolic process IEP HCCA
BP GO:0006198 cAMP catabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009154 purine ribonucleotide catabolic process IEP HCCA
BP GO:0009166 nucleotide catabolic process IEP HCCA
BP GO:0009187 cyclic nucleotide metabolic process IEP HCCA
BP GO:0009214 cyclic nucleotide catabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009261 ribonucleotide catabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046058 cAMP metabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0052652 cyclic purine nucleotide metabolic process IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072523 purine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 700 742
IPR003959 ATPase_AAA_core 541 677
IPR000642 Peptidase_M41 770 971
No external refs found!