ZHONGCHA04071 (RFC3)


Aliases : RFC3

Description : no annotation & original description: none


Gene families : OG0016943 (OrthoFinder) Phylogenetic Tree(s): OG0016943_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ZHONGCHA04071
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
ECHA00378 RFC3 no annotation & original description: none 0.03 OrthoFinder
GWHTACFB017669 RFC3 no annotation & original description: Protein=GWHPACFB017669 0.05 OrthoFinder
TIEGUANYIN48152 RFC3 no annotation & original description: none 0.1 OrthoFinder
ECHA00378 RFC3 no annotation & original description: none 0.03 OrthoFinder
GWHTACFB017669 RFC3 no annotation & original description: Protein=GWHPACFB017669 0.05 OrthoFinder
TIEGUANYIN48152 RFC3 no annotation & original description: none 0.1 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
CC GO:0005730 nucleolus IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006270 DNA replication initiation IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0008134 transcription factor binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004864 protein phosphatase inhibitor activity IEP HCCA
MF GO:0004865 protein serine/threonine phosphatase inhibitor activity IEP HCCA
CC GO:0005929 cilium IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 DNA damage response IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0008962 phosphatidylglycerophosphatase activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
CC GO:0009379 Holliday junction helicase complex IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010563 negative regulation of phosphorus metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0010923 negative regulation of phosphatase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019212 phosphatase inhibitor activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0031400 negative regulation of protein modification process IEP HCCA
CC GO:0031514 motile cilium IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032515 negative regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
CC GO:0033202 DNA helicase complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0035305 negative regulation of dephosphorylation IEP HCCA
BP GO:0035308 negative regulation of protein dephosphorylation IEP HCCA
BP GO:0042157 lipoprotein metabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0042995 cell projection IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0045936 negative regulation of phosphate metabolic process IEP HCCA
BP GO:0048870 cell motility IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0051346 negative regulation of hydrolase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0120025 plasma membrane bounded cell projection IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000529 Ribosomal_S6 141 229
No external refs found!