ZHONGCHA04093 (DRM3, AtDRM3)

Aliases : DRM3, AtDRM3

Description : Probable inactive DNA (cytosine-5)-methyltransferase DRM3 & original description: none

Gene families : OG0016954 (OrthoFinder) Phylogenetic Tree(s): OG0016954_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ZHONGCHA04093
Cluster	HCCA: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
ANJIBAICHA10363	DRM3, AtDRM3	Probable inactive DNA (cytosine-5)-methyltransferase...	0.04	OrthoFinder
GWHTACFB017689	DRM3, AtDRM3	Probable inactive DNA (cytosine-5)-methyltransferase...	0.11	OrthoFinder
GWHTAZTZ017089	DRM3, AtDRM3	Probable inactive DNA (cytosine-5)-methyltransferase...	0.04	OrthoFinder
HUANGJINYA03379	DRM3, AtDRM3	Probable inactive DNA (cytosine-5)-methyltransferase...	0.03	OrthoFinder
LJCHANGYE02720	DRM3, AtDRM3	Probable inactive DNA (cytosine-5)-methyltransferase...	0.03	OrthoFinder
ZIJUAN08010	DRM3, AtDRM3	Probable inactive DNA (cytosine-5)-methyltransferase...	0.07	OrthoFinder
ANJIBAICHA10363	DRM3, AtDRM3	Probable inactive DNA (cytosine-5)-methyltransferase...	0.04	OrthoFinder
CSS0044517.1	CSS0044517, DRM3, AtDRM3	Probable inactive DNA (cytosine-5)-methyltransferase...	0.04	OrthoFinder
GWHTACFB017689	DRM3, AtDRM3	Probable inactive DNA (cytosine-5)-methyltransferase...	0.11	OrthoFinder
GWHTAZTZ017089	DRM3, AtDRM3	Probable inactive DNA (cytosine-5)-methyltransferase...	0.04	OrthoFinder
HUANGJINYA03379	DRM3, AtDRM3	Probable inactive DNA (cytosine-5)-methyltransferase...	0.03	OrthoFinder
LJCHANGYE02720	DRM3, AtDRM3	Probable inactive DNA (cytosine-5)-methyltransferase...	0.03	OrthoFinder
ZIJUAN08010	DRM3, AtDRM3	Probable inactive DNA (cytosine-5)-methyltransferase...	0.07	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003678	DNA helicase activity	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	IEA	Interproscan
BP	GO:0006310	DNA recombination	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	DNA damage response	None	Extended
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0009378	four-way junction helicase activity	IEA	Interproscan
CC	GO:0009379	Holliday junction helicase complex	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0033202	DNA helicase complex	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
CC	GO:0005730	nucleolus	IEP	HCCA
CC	GO:0005929	cilium	IEP	HCCA
BP	GO:0006270	DNA replication initiation	IEP	HCCA
BP	GO:0006869	lipid transport	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
CC	GO:0031514	motile cilium	IEP	HCCA
BP	GO:0042157	lipoprotein metabolic process	IEP	HCCA
CC	GO:0042995	cell projection	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
BP	GO:0048870	cell motility	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
CC	GO:0120025	plasma membrane bounded cell projection	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

ZHONGCHA04093 (DRM3, AtDRM3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation