ZHONGCHA07921

Description : 50S ribosomal protein L17, chloroplastic & original description: none

Gene families : OG0007370 (OrthoFinder) Phylogenetic Tree(s): OG0007370_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ZHONGCHA07921
Cluster	HCCA: Cluster_284

Target	Alias	Description	ECC score	Gene Family Method
ANJIBAICHA04071	No alias	50S ribosomal protein L17, chloroplastic & original...	0.04	OrthoFinder
CSA001003.1	CSA001003	50S ribosomal protein L17, chloroplastic & original...	0.12	OrthoFinder
CSA017388.1	CSA017388	50S ribosomal protein L17, chloroplastic & original...	0.09	OrthoFinder
ECHA05702	No alias	50S ribosomal protein L17, chloroplastic & original...	0.17	OrthoFinder
FUDINGDABAI01010	No alias	50S ribosomal protein L17, chloroplastic & original...	0.19	OrthoFinder
GWHTACFB005057	No alias	50S ribosomal protein L17, chloroplastic & original...	0.12	OrthoFinder
GWHTAZTZ033268	No alias	50S ribosomal protein L17, chloroplastic & original...	0.07	OrthoFinder
HUANGJINYA01941	No alias	50S ribosomal protein L17, chloroplastic & original...	0.08	OrthoFinder
JINXUAN13293	No alias	50S ribosomal protein L17, chloroplastic & original...	0.11	OrthoFinder
LJCHANGYE24021	No alias	50S ribosomal protein L17, chloroplastic & original...	0.07	OrthoFinder
TIEGUANYIN08945	No alias	50S ribosomal protein L17, chloroplastic & original...	0.03	OrthoFinder
ZIJUAN49330	No alias	50S ribosomal protein L17, chloroplastic & original...	0.03	OrthoFinder
ANJIBAICHA04071	No alias	50S ribosomal protein L17, chloroplastic & original...	0.04	OrthoFinder
CSA001003.1	CSA001003	50S ribosomal protein L17, chloroplastic & original...	0.12	OrthoFinder
CSA017388.1	CSA017388	50S ribosomal protein L17, chloroplastic & original...	0.09	OrthoFinder
CSS0012262.1	CSS0012262	50S ribosomal protein L17, chloroplastic & original...	0.12	OrthoFinder
CSS0049771.1	CSS0049771	50S ribosomal protein L17, chloroplastic & original...	0.02	OrthoFinder
ECHA05702	No alias	50S ribosomal protein L17, chloroplastic & original...	0.17	OrthoFinder
FUDINGDABAI01010	No alias	50S ribosomal protein L17, chloroplastic & original...	0.19	OrthoFinder
GWHTACFB005057	No alias	50S ribosomal protein L17, chloroplastic & original...	0.12	OrthoFinder
GWHTAZTZ033268	No alias	50S ribosomal protein L17, chloroplastic & original...	0.07	OrthoFinder
HUANGJINYA01941	No alias	50S ribosomal protein L17, chloroplastic & original...	0.08	OrthoFinder
JINXUAN13293	No alias	50S ribosomal protein L17, chloroplastic & original...	0.11	OrthoFinder
LJCHANGYE24021	No alias	50S ribosomal protein L17, chloroplastic & original...	0.07	OrthoFinder
TIEGUANYIN08945	No alias	50S ribosomal protein L17, chloroplastic & original...	0.03	OrthoFinder
ZIJUAN49330	No alias	50S ribosomal protein L17, chloroplastic & original...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0001401	SAM complex	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003684	damaged DNA binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004177	aminopeptidase activity	IEP	HCCA
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEP	HCCA
MF	GO:0005315	inorganic phosphate transmembrane transporter activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
CC	GO:0005742	mitochondrial outer membrane translocase complex	IEP	HCCA
CC	GO:0005845	mRNA cap binding complex	IEP	HCCA
BP	GO:0006289	nucleotide-excision repair	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006479	protein methylation	IEP	HCCA
BP	GO:0006480	N-terminal protein amino acid methylation	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0006817	phosphate ion transport	IEP	HCCA
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008171	O-methyltransferase activity	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
BP	GO:0008213	protein alkylation	IEP	HCCA
CC	GO:0008290	F-actin capping protein complex	IEP	HCCA
BP	GO:0008643	carbohydrate transport	IEP	HCCA
MF	GO:0008649	rRNA methyltransferase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
MF	GO:0008982	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0009401	phosphoenolpyruvate-dependent sugar phosphotransferase system	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0009890	negative regulation of biosynthetic process	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0010639	negative regulation of organelle organization	IEP	HCCA
MF	GO:0015144	carbohydrate transmembrane transporter activity	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016151	nickel cation binding	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0017148	negative regulation of translation	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
BP	GO:0030832	regulation of actin filament length	IEP	HCCA
BP	GO:0030833	regulation of actin filament polymerization	IEP	HCCA
BP	GO:0030834	regulation of actin filament depolymerization	IEP	HCCA
BP	GO:0030835	negative regulation of actin filament depolymerization	IEP	HCCA
BP	GO:0030837	negative regulation of actin filament polymerization	IEP	HCCA
MF	GO:0031072	heat shock protein binding	IEP	HCCA
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0031333	negative regulation of protein-containing complex assembly	IEP	HCCA
BP	GO:0031365	N-terminal protein amino acid modification	IEP	HCCA
BP	GO:0032271	regulation of protein polymerization	IEP	HCCA
BP	GO:0032272	negative regulation of protein polymerization	IEP	HCCA
BP	GO:0032535	regulation of cellular component size	IEP	HCCA
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	HCCA
BP	GO:0032970	regulation of actin filament-based process	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
BP	GO:0033043	regulation of organelle organization	IEP	HCCA
BP	GO:0034219	carbohydrate transmembrane transport	IEP	HCCA
BP	GO:0034249	negative regulation of amide metabolic process	IEP	HCCA
CC	GO:0034518	RNA cap binding complex	IEP	HCCA
BP	GO:0043242	negative regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043254	regulation of protein-containing complex assembly	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
BP	GO:0044087	regulation of cellular component biogenesis	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0048523	negative regulation of cellular process	IEP	HCCA
BP	GO:0051016	barbed-end actin filament capping	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051129	negative regulation of cellular component organization	IEP	HCCA
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051248	negative regulation of protein metabolic process	IEP	HCCA
BP	GO:0051493	regulation of cytoskeleton organization	IEP	HCCA
BP	GO:0051494	negative regulation of cytoskeleton organization	IEP	HCCA
BP	GO:0051693	actin filament capping	IEP	HCCA
BP	GO:0065008	regulation of biological quality	IEP	HCCA
BP	GO:0090066	regulation of anatomical structure size	IEP	HCCA
BP	GO:0098657	import into cell	IEP	HCCA
BP	GO:0098704	carbohydrate import across plasma membrane	IEP	HCCA
BP	GO:0098739	import across plasma membrane	IEP	HCCA
CC	GO:0098799	outer mitochondrial membrane protein complex	IEP	HCCA
BP	GO:0110053	regulation of actin filament organization	IEP	HCCA
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	HCCA
BP	GO:1901879	regulation of protein depolymerization	IEP	HCCA
BP	GO:1901880	negative regulation of protein depolymerization	IEP	HCCA
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	HCCA
BP	GO:1902904	negative regulation of supramolecular fiber organization	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000456	Ribosomal_L17	163	259

External Links

No external refs found!

ZHONGCHA07921

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation