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  3. Camellia sinensis var. sinensis cv. 'Zhongcha 108'
  4. Sequence
  5. ZHONGCHA11826

ZHONGCHA11826


Description : Ran-binding protein 1 homolog b & original description: none


Gene families : OG0007527 (OrthoFinder) Phylogenetic Tree(s): OG0007527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ZHONGCHA11826
Cluster HCCA: Cluster_453

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA17545 No alias Ran-binding protein 1 homolog b & original description: none 0.04 OrthoFinder
CSA019241.1 CSA019241 Ran-binding protein 1 homolog b & original description: none 0.03 OrthoFinder
FUDINGDABAI09304 No alias Ran-binding protein 1 homolog b & original description: none 0.08 OrthoFinder
GWHTACFB003542 No alias Ran-binding protein 1 homolog b & original description:... 0.06 OrthoFinder
HUANGJINYA09048 No alias Ran-binding protein 1 homolog b & original description: none 0.06 OrthoFinder
JINXUAN11757 No alias Ran-binding protein 1 homolog b & original description: none 0.05 OrthoFinder
ANJIBAICHA17545 No alias Ran-binding protein 1 homolog b & original description: none 0.04 OrthoFinder
CSA019241.1 CSA019241 Ran-binding protein 1 homolog b & original description: none 0.03 OrthoFinder
FUDINGDABAI09304 No alias Ran-binding protein 1 homolog b & original description: none 0.08 OrthoFinder
GWHTACFB003542 No alias Ran-binding protein 1 homolog b & original description:... 0.06 OrthoFinder
HUANGJINYA09048 No alias Ran-binding protein 1 homolog b & original description: none 0.06 OrthoFinder
JINXUAN11757 No alias Ran-binding protein 1 homolog b & original description: none 0.05 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0046907 intracellular transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
BP GO:0000921 septin ring assembly IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005882 intermediate filament IEP HCCA
CC GO:0005929 cilium IEP HCCA
CC GO:0005940 septin ring IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016987 sigma factor activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031106 septin ring organization IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0031514 motile cilium IEP HCCA
CC GO:0032156 septin cytoskeleton IEP HCCA
BP GO:0032185 septin cytoskeleton organization IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
CC GO:0042995 cell projection IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
CC GO:0045095 keratin filament IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0048870 cell motility IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051087 protein-folding chaperone binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071824 protein-DNA complex organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0120025 plasma membrane bounded cell projection IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000156 Ran_bind_dom 43 161
No external refs found!