ZHONGCHA12711

Description : no annotation & original description: none

Gene families : OG0000482 (OrthoFinder) Phylogenetic Tree(s): OG0000482_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ZHONGCHA12711
Cluster	HCCA: Cluster_140

Target	Alias	Description	ECC score	Gene Family Method
ANJIBAICHA11741	No alias	no annotation & original description: none	0.03	OrthoFinder
ECHA21069	No alias	no annotation & original description: none	0.03	OrthoFinder
GWHTACFB005090	No alias	no annotation & original description: Protein=GWHPACFB005090	0.07	OrthoFinder
HUANGJINYA03826	No alias	no annotation & original description: none	0.03	OrthoFinder
LJCHANGYE04049	No alias	no annotation & original description: none	0.04	OrthoFinder
LJCHANGYE06593	No alias	no annotation & original description: none	0.02	OrthoFinder
ANJIBAICHA11741	No alias	no annotation & original description: none	0.03	OrthoFinder
ECHA21069	No alias	no annotation & original description: none	0.03	OrthoFinder
GWHTACFB005090	No alias	no annotation & original description: Protein=GWHPACFB005090	0.07	OrthoFinder
HUANGJINYA03826	No alias	no annotation & original description: none	0.03	OrthoFinder
LJCHANGYE04049	No alias	no annotation & original description: none	0.04	OrthoFinder
LJCHANGYE06593	No alias	no annotation & original description: none	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0000172	ribonuclease MRP complex	IEA	Interproscan
BP	GO:0000966	RNA 5'-end processing	None	Extended
BP	GO:0001682	tRNA 5'-leader removal	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005655	nucleolar ribonuclease P complex	IEA	Interproscan
CC	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
CC	GO:0030677	ribonuclease P complex	None	Extended
CC	GO:0030681	multimeric ribonuclease P complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099116	tRNA 5'-end processing	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1902555	endoribonuclease complex	None	Extended
CC	GO:1905348	endonuclease complex	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
BP	GO:0000723	telomere maintenance	IEP	HCCA
BP	GO:0002097	tRNA wobble base modification	IEP	HCCA
BP	GO:0002098	tRNA wobble uridine modification	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003917	DNA topoisomerase type I (single strand cut, ATP-independent) activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
CC	GO:0005681	spliceosomal complex	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006400	tRNA modification	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0008199	ferric iron binding	IEP	HCCA
BP	GO:0008612	peptidyl-lysine modification to peptidyl-hypusine	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
CC	GO:0030684	preribosome	IEP	HCCA
CC	GO:0032040	small-subunit processome	IEP	HCCA
BP	GO:0032200	telomere organization	IEP	HCCA
MF	GO:0032977	membrane insertase activity	IEP	HCCA
CC	GO:0033588	elongator holoenzyme complex	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140104	molecular carrier activity	IEP	HCCA
MF	GO:0140597	protein carrier chaperone	IEP	HCCA
MF	GO:1901681	sulfur compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002775	DNA/RNA-bd_Alba-like	19	80

External Links

No external refs found!

ZHONGCHA12711

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation