ZHONGCHA19601

Description : 30S ribosomal protein S6 alpha, chloroplastic & original description: none

Gene families : OG0004748 (OrthoFinder) Phylogenetic Tree(s): OG0004748_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ZHONGCHA19601
Cluster	HCCA: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
ANJIBAICHA27900	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.03	OrthoFinder
FUDINGDABAI20212	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.06	OrthoFinder
GWHTAZTZ040773	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.03	OrthoFinder
GWHTAZTZ040780	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.03	OrthoFinder
TIEGUANYIN11931	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.04	OrthoFinder
ANJIBAICHA27900	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.03	OrthoFinder
CSS0022378.1	CSS0022378	30S ribosomal protein S6 alpha, chloroplastic &...	0.04	OrthoFinder
CSS0040137.1	CSS0040137	30S ribosomal protein S6 alpha, chloroplastic &...	0.03	OrthoFinder
CSS0048233.1	CSS0048233	30S ribosomal protein S6 alpha, chloroplastic &...	0.13	OrthoFinder
FUDINGDABAI20212	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.06	OrthoFinder
GWHTAZTZ040773	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.03	OrthoFinder
GWHTAZTZ040780	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.03	OrthoFinder
TIEGUANYIN11931	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019843	rRNA binding	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0004827	proline-tRNA ligase activity	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0046422	violaxanthin de-epoxidase activity	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000529	Ribosomal_S6	113	211

External Links

No external refs found!

ZHONGCHA19601

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation