ZHONGCHA33358 (POLGAMMA2)

Aliases : POLGAMMA2

Description : DNA polymerase I B, chloroplastic/mitochondrial & original description: none

Gene families : OG0014897 (OrthoFinder) Phylogenetic Tree(s): OG0014897_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ZHONGCHA33358
Cluster	HCCA: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
ECHA34438	POLGAMMA2	DNA polymerase I B, chloroplastic/mitochondrial &...	0.04	OrthoFinder
FUDINGDABAI32574	POLGAMMA2	DNA polymerase I B, chloroplastic/mitochondrial &...	0.04	OrthoFinder
GWHTACFB018898	POLGAMMA2	DNA polymerase I B, chloroplastic/mitochondrial &...	0.07	OrthoFinder
HUANGJINYA31719	POLGAMMA2	DNA polymerase I B, chloroplastic/mitochondrial &...	0.03	OrthoFinder
LJCHANGYE36250	POLGAMMA2	DNA polymerase I B, chloroplastic/mitochondrial &...	0.07	OrthoFinder
TIEGUANYIN23830	POLGAMMA2	DNA polymerase I A, chloroplastic/mitochondrial &...	0.03	OrthoFinder
ECHA34438	POLGAMMA2	DNA polymerase I B, chloroplastic/mitochondrial &...	0.04	OrthoFinder
FUDINGDABAI32574	POLGAMMA2	DNA polymerase I B, chloroplastic/mitochondrial &...	0.04	OrthoFinder
GWHTACFB018898	POLGAMMA2	DNA polymerase I B, chloroplastic/mitochondrial &...	0.07	OrthoFinder
HUANGJINYA31719	POLGAMMA2	DNA polymerase I B, chloroplastic/mitochondrial &...	0.03	OrthoFinder
LJCHANGYE36250	POLGAMMA2	DNA polymerase I B, chloroplastic/mitochondrial &...	0.07	OrthoFinder
TIEGUANYIN23830	POLGAMMA2	DNA polymerase I A, chloroplastic/mitochondrial &...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003887	DNA-directed DNA polymerase activity	IEA	Interproscan
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004527	exonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	IEA	Interproscan
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008408	3'-5' exonuclease activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0034061	DNA polymerase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
BP	GO:0001510	RNA methylation	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0003697	single-stranded DNA binding	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004176	ATP-dependent peptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0006083	acetate metabolic process	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006302	double-strand break repair	IEP	HCCA
BP	GO:0006310	DNA recombination	IEP	HCCA
BP	GO:0006313	DNA transposition	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006808	regulation of nitrogen utilization	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006974	DNA damage response	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
MF	GO:0008175	tRNA methyltransferase activity	IEP	HCCA
MF	GO:0008176	tRNA (guanine-N7-)-methyltransferase activity	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
MF	GO:0009378	four-way junction helicase activity	IEP	HCCA
BP	GO:0009403	toxin biosynthetic process	IEP	HCCA
BP	GO:0009404	toxin metabolic process	IEP	HCCA
BP	GO:0009452	7-methylguanosine RNA capping	IEP	HCCA
MF	GO:0016423	tRNA (guanine) methyltransferase activity	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
BP	GO:0019748	secondary metabolic process	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
BP	GO:0032101	regulation of response to external stimulus	IEP	HCCA
BP	GO:0032104	regulation of response to extracellular stimulus	IEP	HCCA
BP	GO:0032107	regulation of response to nutrient levels	IEP	HCCA
BP	GO:0032196	transposition	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0036260	RNA capping	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0043385	mycotoxin metabolic process	IEP	HCCA
BP	GO:0043386	mycotoxin biosynthetic process	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	HCCA
BP	GO:0045122	aflatoxin biosynthetic process	IEP	HCCA
BP	GO:0046222	aflatoxin metabolic process	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901376	organic heteropentacyclic compound metabolic process	IEP	HCCA
BP	GO:1901378	organic heteropentacyclic compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001098	DNA-dir_DNA_pol_A_palm_dom	870	1202
IPR002562	3'-5'_exonuclease_dom	436	646

External Links

No external refs found!

ZHONGCHA33358 (POLGAMMA2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation