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  3. Camellia sinensis var. sinensis cv. 'Zhongcha 108'
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  5. ZHONGCHA34227

ZHONGCHA34227


Description : Pentatricopeptide repeat-containing protein At4g21705, mitochondrial & original description: none


Gene families : OG0008067 (OrthoFinder) Phylogenetic Tree(s): OG0008067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ZHONGCHA34227
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
CSA013138.1 CSA013138 Pentatricopeptide repeat-containing protein At4g21705,... 0.06 OrthoFinder
ECHA61153 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.04 OrthoFinder
GWHTACFB022444 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.06 OrthoFinder
HUANGJINYA54355 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.08 OrthoFinder
LJCHANGYE63588 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.06 OrthoFinder
TIEGUANYIN43116 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.06 OrthoFinder
ZIJUAN01106 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.06 OrthoFinder
CSA013138.1 CSA013138 Pentatricopeptide repeat-containing protein At4g21705,... 0.06 OrthoFinder
ECHA61153 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.04 OrthoFinder
GWHTACFB022444 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.06 OrthoFinder
HUANGJINYA54355 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.08 OrthoFinder
LJCHANGYE63588 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.06 OrthoFinder
TIEGUANYIN43116 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.06 OrthoFinder
ZIJUAN01106 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005739 mitochondrion IEA Interproscan
CC GO:0005869 dynactin complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004864 protein phosphatase inhibitor activity IEP HCCA
MF GO:0004865 protein serine/threonine phosphatase inhibitor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010563 negative regulation of phosphorus metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0010923 negative regulation of phosphatase activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019212 phosphatase inhibitor activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0031400 negative regulation of protein modification process IEP HCCA
BP GO:0032515 negative regulation of phosphoprotein phosphatase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0035305 negative regulation of dephosphorylation IEP HCCA
BP GO:0035308 negative regulation of protein dephosphorylation IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0045936 negative regulation of phosphate metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0051346 negative regulation of hydrolase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 58 87
IPR002885 Pentatricopeptide_repeat 271 297
IPR002885 Pentatricopeptide_repeat 235 262
IPR002885 Pentatricopeptide_repeat 91 136
No external refs found!