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  3. Camellia sinensis var. sinensis cv. 'Zhongcha 108'
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  5. ZHONGCHA37394

ZHONGCHA37394 (PP2A-4)


Aliases : PP2A-4

Description : Serine/threonine-protein phosphatase PP2A catalytic subunit & original description: none


Gene families : OG0001237 (OrthoFinder) Phylogenetic Tree(s): OG0001237_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ZHONGCHA37394
Cluster HCCA: Cluster_490

Target Alias Description ECC score Gene Family Method Actions
ECHA09168 PP2A-4 Serine/threonine-protein phosphatase PP2A-4 catalytic... 0.05 OrthoFinder
ECHA39234 PP2A-4 Serine/threonine-protein phosphatase PP2A catalytic... 0.06 OrthoFinder
JINXUAN40705 PP2A-4 Serine/threonine-protein phosphatase PP2A catalytic... 0.02 OrthoFinder
TIEGUANYIN05842 PP2A-4 Serine/threonine-protein phosphatase PP2A catalytic... 0.04 OrthoFinder
ECHA09168 PP2A-4 Serine/threonine-protein phosphatase PP2A-4 catalytic... 0.05 OrthoFinder
ECHA39234 PP2A-4 Serine/threonine-protein phosphatase PP2A catalytic... 0.06 OrthoFinder
JINXUAN40705 PP2A-4 Serine/threonine-protein phosphatase PP2A catalytic... 0.02 OrthoFinder
TIEGUANYIN05842 PP2A-4 Serine/threonine-protein phosphatase PP2A catalytic... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006361 transcription initiation at RNA polymerase I promoter IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044000 movement in host IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0044409 entry into host IEP HCCA
BP GO:0046718 viral entry into host cell IEP HCCA
BP GO:0051701 biological process involved in interaction with host IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0090729 toxin activity IEP HCCA
MF GO:0140223 general transcription initiation factor activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR004843 Calcineurin-like_PHP_ApaH 66 257
No external refs found!