ZHONGCHA41186

Description : E3 ubiquitin-protein ligase SINA-like 10 & original description: none

Gene families : OG0019913 (OrthoFinder) Phylogenetic Tree(s): OG0019913_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ZHONGCHA41186
Cluster	HCCA: Cluster_550

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	None	Extended
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	None	Extended
BP	GO:0000398	mRNA splicing, via spliceosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003743	translation initiation factor activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004190	aspartic-type endopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005681	spliceosomal complex	IEA	Interproscan
CC	GO:0005730	nucleolus	IEA	Interproscan
CC	GO:0005737	cytoplasm	IEA	Interproscan
CC	GO:0005741	mitochondrial outer membrane	IEA	Interproscan
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006270	DNA replication initiation	IEA	Interproscan
BP	GO:0006351	DNA-templated transcription	None	Extended
BP	GO:0006354	DNA-templated transcription elongation	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0006368	transcription elongation by RNA polymerase II	IEA	Interproscan
BP	GO:0006383	transcription by RNA polymerase III	IEA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	None	Extended
BP	GO:0006413	translational initiation	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0007275	multicellular organism development	IEA	Interproscan
CC	GO:0008023	transcription elongation factor complex	None	Extended
BP	GO:0008104	protein localization	None	Extended
MF	GO:0008134	transcription factor binding	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
CC	GO:0008287	protein serine/threonine phosphatase complex	None	Extended
BP	GO:0008380	RNA splicing	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0016485	protein processing	IEA	Interproscan
BP	GO:0016570	histone modification	IEA	Interproscan
CC	GO:0016593	Cdc73/Paf1 complex	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
CC	GO:0019031	viral envelope	IEA	Interproscan
MF	GO:0019208	phosphatase regulator activity	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	IEA	Interproscan
CC	GO:0019867	outer membrane	None	Extended
MF	GO:0019888	protein phosphatase regulator activity	IEA	Interproscan
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
CC	GO:0030289	protein phosphatase 4 complex	IEA	Interproscan
CC	GO:0030684	preribosome	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0031369	translation initiation factor binding	IEA	Interproscan
CC	GO:0031966	mitochondrial membrane	None	Extended
CC	GO:0031968	organelle outer membrane	None	Extended
CC	GO:0032040	small-subunit processome	IEA	Interproscan
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
CC	GO:0036338	viral membrane	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044423	virion component	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0051604	protein maturation	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0070001	aspartic-type peptidase activity	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097659	nucleic acid-templated transcription	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1903293	phosphatase complex	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000118	histone deacetylase complex	IEP	HCCA
BP	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	IEP	HCCA
BP	GO:0001522	pseudouridine synthesis	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005217	intracellular ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0005219	ryanodine-sensitive calcium-release channel activity	IEP	HCCA
MF	GO:0005261	monoatomic cation channel activity	IEP	HCCA
MF	GO:0005262	calcium channel activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006476	protein deacetylation	IEP	HCCA
BP	GO:0006873	intracellular monoatomic ion homeostasis	IEP	HCCA
BP	GO:0006874	intracellular calcium ion homeostasis	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0009982	pseudouridine synthase activity	IEP	HCCA
MF	GO:0015085	calcium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0015278	calcium-release channel activity	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
BP	GO:0016575	histone deacetylation	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
BP	GO:0019725	cellular homeostasis	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
BP	GO:0030003	intracellular monoatomic cation homeostasis	IEP	HCCA
BP	GO:0030490	maturation of SSU-rRNA	IEP	HCCA
MF	GO:0030515	snoRNA binding	IEP	HCCA
MF	GO:0031491	nucleosome binding	IEP	HCCA
BP	GO:0035601	protein deacylation	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0048878	chemical homeostasis	IEP	HCCA
BP	GO:0050801	monoatomic ion homeostasis	IEP	HCCA
BP	GO:0055074	calcium ion homeostasis	IEP	HCCA
BP	GO:0055080	monoatomic cation homeostasis	IEP	HCCA
BP	GO:0055082	intracellular chemical homeostasis	IEP	HCCA
CC	GO:0070823	HDA1 complex	IEP	HCCA
BP	GO:0071824	protein-DNA complex organization	IEP	HCCA
BP	GO:0098732	macromolecule deacylation	IEP	HCCA
BP	GO:0098771	inorganic ion homeostasis	IEP	HCCA
MF	GO:0099094	ligand-gated monoatomic cation channel activity	IEP	HCCA
MF	GO:0099604	ligand-gated calcium channel activity	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA
MF	GO:1901702	salt transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR018121	7-in-absentia-prot_TRAF-dom	155	288

External Links

No external refs found!

ZHONGCHA41186

Expression Profile

Co-expression Networks

Functional Annotation