ZHONGCHA42504

Description : 50S ribosomal protein L35, chloroplastic & original description: none

Gene families : OG0001885 (OrthoFinder) Phylogenetic Tree(s): OG0001885_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ZHONGCHA42504
Cluster	HCCA: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
FUDINGDABAI46412	No alias	50S ribosomal protein L35, chloroplastic & original...	0.04	OrthoFinder
GWHTACFB013291	No alias	50S ribosomal protein L35, chloroplastic & original...	0.12	OrthoFinder
GWHTAZTZ006678	No alias	50S ribosomal protein L35, chloroplastic & original...	0.02	OrthoFinder
GWHTAZTZ006703	No alias	no annotation & original description: Protein=GWHPAZTZ006703	0.03	OrthoFinder
HUANGJINYA53910	No alias	50S ribosomal protein L35, chloroplastic & original...	0.03	OrthoFinder
JINXUAN52221	No alias	50S ribosomal protein L35, chloroplastic & original...	0.02	OrthoFinder
LJCHANGYE61824	No alias	50S ribosomal protein L35, chloroplastic & original...	0.02	OrthoFinder
TIEGUANYIN19290	No alias	no annotation & original description: none	0.04	OrthoFinder
TIEGUANYIN26350	No alias	50S ribosomal protein L35, chloroplastic & original...	0.06	OrthoFinder
CSS0035436.1	CSS0035436	50S ribosomal protein L35, chloroplastic & original...	0.12	OrthoFinder
FUDINGDABAI46412	No alias	50S ribosomal protein L35, chloroplastic & original...	0.04	OrthoFinder
GWHTACFB013291	No alias	50S ribosomal protein L35, chloroplastic & original...	0.12	OrthoFinder
GWHTAZTZ006678	No alias	50S ribosomal protein L35, chloroplastic & original...	0.02	OrthoFinder
GWHTAZTZ006703	No alias	no annotation & original description: Protein=GWHPAZTZ006703	0.03	OrthoFinder
HUANGJINYA53910	No alias	50S ribosomal protein L35, chloroplastic & original...	0.03	OrthoFinder
JINXUAN52221	No alias	50S ribosomal protein L35, chloroplastic & original...	0.02	OrthoFinder
LJCHANGYE61824	No alias	50S ribosomal protein L35, chloroplastic & original...	0.02	OrthoFinder
TIEGUANYIN19290	No alias	no annotation & original description: none	0.04	OrthoFinder
TIEGUANYIN26350	No alias	50S ribosomal protein L35, chloroplastic & original...	0.06	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003684	damaged DNA binding	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	HCCA
MF	GO:0004109	coproporphyrinogen oxidase activity	IEP	HCCA
MF	GO:0004177	aminopeptidase activity	IEP	HCCA
MF	GO:0004807	triose-phosphate isomerase activity	IEP	HCCA
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEP	HCCA
CC	GO:0005845	mRNA cap binding complex	IEP	HCCA
BP	GO:0006289	nucleotide-excision repair	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007130	synaptonemal complex assembly	IEP	HCCA
BP	GO:0007131	reciprocal meiotic recombination	IEP	HCCA
BP	GO:0007276	gamete generation	IEP	HCCA
BP	GO:0007283	spermatogenesis	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0009890	negative regulation of biosynthetic process	IEP	HCCA
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	HCCA
MF	GO:0016872	intramolecular lyase activity	IEP	HCCA
MF	GO:0016987	sigma factor activity	IEP	HCCA
BP	GO:0017148	negative regulation of translation	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0032392	DNA geometric change	IEP	HCCA
BP	GO:0032508	DNA duplex unwinding	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
MF	GO:0034061	DNA polymerase activity	IEP	HCCA
BP	GO:0034249	negative regulation of amide metabolic process	IEP	HCCA
CC	GO:0034518	RNA cap binding complex	IEP	HCCA
MF	GO:0035596	methylthiotransferase activity	IEP	HCCA
BP	GO:0035825	homologous recombination	IEP	HCCA
BP	GO:0048232	male gamete generation	IEP	HCCA
BP	GO:0048609	multicellular organismal reproductive process	IEP	HCCA
MF	GO:0050497	alkylthioltransferase activity	IEP	HCCA
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051248	negative regulation of protein metabolic process	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
MF	GO:0051920	peroxiredoxin activity	IEP	HCCA
BP	GO:0070192	chromosome organization involved in meiotic cell cycle	IEP	HCCA
BP	GO:0070193	synaptonemal complex organization	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0140527	reciprocal homologous recombination	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1903046	meiotic cell cycle process	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR021137	Ribosomal_L35	81	137

External Links

No external refs found!

ZHONGCHA42504

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation