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  3. Camellia sinensis var. sinensis cv. 'Zhongcha 108'
  4. Sequence
  5. ZHONGCHA43688

ZHONGCHA43688


Description : ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic & original description: none


Gene families : OG0010793 (OrthoFinder) Phylogenetic Tree(s): OG0010793_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ZHONGCHA43688
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
CSA013679.1 CSA013679 ATP-dependent Clp protease ATP-binding subunit CLPT1,... 0.02 OrthoFinder
LJCHANGYE52876 No alias ATP-dependent Clp protease ATP-binding subunit CLPT1,... 0.07 OrthoFinder
TIEGUANYIN32308 No alias ATP-dependent Clp protease ATP-binding subunit CLPT1,... 0.03 OrthoFinder
CSA013679.1 CSA013679 ATP-dependent Clp protease ATP-binding subunit CLPT1,... 0.02 OrthoFinder
CSS0032928.1 CSS0032928 ATP-dependent Clp protease ATP-binding subunit CLPT1,... 0.03 OrthoFinder
LJCHANGYE52876 No alias ATP-dependent Clp protease ATP-binding subunit CLPT1,... 0.07 OrthoFinder
TIEGUANYIN32308 No alias ATP-dependent Clp protease ATP-binding subunit CLPT1,... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004832 valine-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006438 valyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0015850 organic hydroxy compound transport IEP HCCA
BP GO:0015918 sterol transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0032365 intracellular lipid transport IEP HCCA
BP GO:0032366 intracellular sterol transport IEP HCCA
BP GO:0032954 regulation of cytokinetic process IEP HCCA
BP GO:0032955 regulation of division septum assembly IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901891 regulation of cell septum assembly IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR004176 Clp_R_dom 183 221
IPR004176 Clp_R_dom 96 148
No external refs found!